Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RNU4-20P-201ENST00000365601 151 ntBASIC1.23□□□□□ -2.21
NCK1P16333 RNU6-245P-201ENST00000384020 107 ntBASIC1.23□□□□□ -2.21
NCK1P16333 SNORA67.2-201ENST00000384300 149 ntBASIC1.23□□□□□ -2.21
NCK1P16333 RNU6-1119P-201ENST00000384349 108 ntBASIC1.23□□□□□ -2.21
NCK1P16333 RNU6-1065P-201ENST00000384513 106 ntBASIC1.23□□□□□ -2.21
NCK1P16333 RNU6-950P-201ENST00000384651 107 ntBASIC1.23□□□□□ -2.21
NCK1P16333 CALM2P3-201ENST00000400429 449 ntBASIC1.23□□□□□ -2.21
NCK1P16333 Y_RNA.595-201ENST00000410403 105 ntBASIC1.23□□□□□ -2.21
NCK1P16333 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
NCK1P16333 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.23□□□□□ -2.21
NCK1P16333 MTCYBP18-201ENST00000501056 747 ntBASIC1.23□□□□□ -2.21
NCK1P16333 AC104576.1-201ENST00000524225 88 ntBASIC1.23□□□□□ -2.21
NCK1P16333 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.23□□□□□ -2.21
NCK1P16333 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.23□□□□□ -2.21
NCK1P16333 AC006362.1-201ENST00000567392 174 ntBASIC1.23□□□□□ -2.21
NCK1P16333 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.23□□□□□ -2.21
NCK1P16333 MIR4498-201ENST00000577599 66 ntBASIC1.23□□□□□ -2.21
NCK1P16333 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
NCK1P16333 AL050343.2-201ENST00000607338 280 ntBASIC1.23□□□□□ -2.21
NCK1P16333 AC095038.3-201ENST00000634439 195 ntBASIC1.23□□□□□ -2.21
NCK1P16333 OR5AK4P-201ENST00000635912 903 ntBASIC1.23□□□□□ -2.21
NCK1P16333 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
NCK1P16333 DEFB108C-201ENST00000400154 252 ntBASIC1.22□□□□□ -2.21
NCK1P16333 RNU6-325P-201ENST00000411132 105 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AC004965.1-201ENST00000413033 213 ntBASIC1.22□□□□□ -2.21
NCK1P16333 COX6CP10-201ENST00000416832 224 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.22□□□□□ -2.21
NCK1P16333 MTCO2P16-201ENST00000436962 677 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.22□□□□□ -2.21
NCK1P16333 AC092473.1-201ENST00000441098 221 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.22□□□□□ -2.21
NCK1P16333 MTND3P16-201ENST00000452205 344 ntBASIC1.22□□□□□ -2.21
NCK1P16333 MTCO3P8-201ENST00000453691 755 ntBASIC1.22□□□□□ -2.21
NCK1P16333 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
NCK1P16333 RN7SKP210-201ENST00000459176 261 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AF186996.7-201ENST00000492781 209 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.22□□□□□ -2.21
NCK1P16333 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.22□□□□□ -2.21
NCK1P16333 Y_RNA.688-201ENST00000516565 95 ntBASIC1.22□□□□□ -2.21
NCK1P16333 RNU6-1198P-201ENST00000516904 67 ntBASIC1.22□□□□□ -2.21
NCK1P16333 MRPS36P4-201ENST00000534436 298 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.22□□□□□ -2.21
NCK1P16333 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.22□□□□□ -2.21
NCK1P16333 AC023043.2-201ENST00000589678 1026 ntBASIC1.22□□□□□ -2.21
NCK1P16333 snoU13.31-201ENST00000607291 104 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AL133215.3-201ENST00000609801 448 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AL121757.2-201ENST00000611223 313 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AL078604.3-201ENST00000615580 211 ntBASIC1.22□□□□□ -2.21
NCK1P16333 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.21□□□□□ -2.22
NCK1P16333 RNU6-1123P-201ENST00000362347 106 ntBASIC1.21□□□□□ -2.22
NCK1P16333 RNU6-1085P-201ENST00000363576 107 ntBASIC1.21□□□□□ -2.22
NCK1P16333 RNU6-137P-201ENST00000363680 108 ntBASIC1.21□□□□□ -2.22
NCK1P16333 SNORD116-9-201ENST00000384000 95 ntBASIC1.21□□□□□ -2.22
NCK1P16333 SNORD116-3-201ENST00000384287 95 ntBASIC1.21□□□□□ -2.22
NCK1P16333 SNORD116-7-201ENST00000384404 95 ntBASIC1.21□□□□□ -2.22
NCK1P16333 RNU6-933P-201ENST00000384424 107 ntBASIC1.21□□□□□ -2.22
NCK1P16333 SNORD116-5-201ENST00000384462 95 ntBASIC1.21□□□□□ -2.22
NCK1P16333 AC008134.1-201ENST00000420943 193 ntBASIC1.21□□□□□ -2.22
NCK1P16333 AC108667.1-201ENST00000428618 249 ntBASIC1.21□□□□□ -2.22
NCK1P16333 MRPS10P2-201ENST00000431226 381 ntBASIC1.21□□□□□ -2.22
NCK1P16333 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
NCK1P16333 HMGN2P34-201ENST00000437647 269 ntBASIC1.21□□□□□ -2.22
NCK1P16333 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.21□□□□□ -2.22
NCK1P16333 NDUFB4P10-201ENST00000452541 359 ntBASIC1.21□□□□□ -2.22
NCK1P16333 TPT1P7-201ENST00000458300 517 ntBASIC1.21□□□□□ -2.22
NCK1P16333 SRRM1P2-201ENST00000464531 1192 ntBASIC1.21□□□□□ -2.22
NCK1P16333 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.21□□□□□ -2.22
NCK1P16333 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.21□□□□□ -2.22
NCK1P16333 RNU6-1038P-201ENST00000516516 104 ntBASIC1.21□□□□□ -2.22
NCK1P16333 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.21□□□□□ -2.22
NCK1P16333 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.21□□□□□ -2.22
NCK1P16333 SCARNA4-201ENST00000629045 128 ntBASIC1.21□□□□□ -2.22
NCK1P16333 MTND5P26-201ENST00000426018 1752 ntBASIC1.21□□□□□ -2.22
NCK1P16333 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
NCK1P16333 Y_RNA.231-201ENST00000364358 102 ntBASIC1.2□□□□□ -2.22
NCK1P16333 RNU6-522P-201ENST00000364497 107 ntBASIC1.2□□□□□ -2.22
NCK1P16333 Y_RNA.381-201ENST00000365666 102 ntBASIC1.2□□□□□ -2.22
NCK1P16333 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
NCK1P16333 AC004866.1-201ENST00000411748 78 ntBASIC1.2□□□□□ -2.22
NCK1P16333 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.2□□□□□ -2.22
NCK1P16333 USP9YP14-201ENST00000430663 563 ntBASIC1.2□□□□□ -2.22
NCK1P16333 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.2□□□□□ -2.22
NCK1P16333 AC073910.1-201ENST00000445047 438 ntBASIC1.2□□□□□ -2.22
NCK1P16333 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.2□□□□□ -2.22
NCK1P16333 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.2□□□□□ -2.22
NCK1P16333 RNU6-405P-201ENST00000516637 110 ntBASIC1.2□□□□□ -2.22
NCK1P16333 MTND1P35-201ENST00000526739 508 ntBASIC1.2□□□□□ -2.22
NCK1P16333 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.2□□□□□ -2.22
NCK1P16333 MIR4709-201ENST00000577272 72 ntBASIC1.2□□□□□ -2.22
NCK1P16333 SNORA59B-202ENST00000578183 701 ntBASIC1.2□□□□□ -2.22
NCK1P16333 RN7SKP299-201ENST00000606679 301 ntBASIC1.2□□□□□ -2.22
NCK1P16333 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.2□□□□□ -2.22
NCK1P16333 FAM157A-202ENST00000615155 405 ntBASIC1.2□□□□□ -2.22
NCK1P16333 AC068137.3-201ENST00000639191 341 ntBASIC1.2□□□□□ -2.22
NCK1P16333 SNORD115-32-201ENST00000364079 82 ntBASIC1.19□□□□□ -2.22
NCK1P16333 Y_RNA.359-201ENST00000365498 102 ntBASIC1.19□□□□□ -2.22
NCK1P16333 U8.10-201ENST00000384260 133 ntBASIC1.19□□□□□ -2.22
NCK1P16333 RNA5SP213-201ENST00000391031 106 ntBASIC1.19□□□□□ -2.22
NCK1P16333 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NCK1P16333 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms