Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.40-201ENST00000362645 93 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 SNORA80A-201ENST00000363922 136 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 RNA5SP42-201ENST00000364278 115 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6-429P-201ENST00000384582 108 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 RNU4-47P-201ENST00000410876 114 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 AC074290.1-201ENST00000448883 135 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 AC091179.3-201ENST00000474761 144 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6-659P-201ENST00000516454 104 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 AL034555.1-201ENST00000604816 211 ntBASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CSB-PGBD3P0DP91 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.172-201ENST00000363765 102 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 RNU6-801P-201ENST00000364087 105 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 Y_RNA.572-201ENST00000384757 98 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 AL512633.1-201ENST00000399931 655 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 MIR208B-201ENST00000401172 77 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 AC025750.2-201ENST00000442609 450 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 RNU7-197P-201ENST00000458836 62 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 snoU13.14-201ENST00000459372 104 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 RPS26P15-201ENST00000488067 348 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 RN7SKP164-201ENST00000516138 266 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 MIR3923-201ENST00000579521 83 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 uc_338.14-201ENST00000613162 166 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 MIR4679-1-201ENST00000637619 75 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 AC018555.1-201ENST00000567548 1980 ntBASIC4.47□□□□□ -1.69
CSB-PGBD3P0DP91 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CSB-PGBD3P0DP91 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.46□□□□□ -1.69
CSB-PGBD3P0DP91 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-834P-201ENST00000362367 110 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-799P-201ENST00000363567 107 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-1248P-201ENST00000391096 64 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 RNY4P18-201ENST00000391107 89 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 SNORA26.5-201ENST00000391215 123 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 RNA5SP354-201ENST00000391247 136 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 AC112771.1-201ENST00000463581 102 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-436P-201ENST00000516171 114 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 SNORA70.14-201ENST00000516205 110 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 AC099654.7-201ENST00000635788 2127 ntBASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.46□□□□□ -1.7
CSB-PGBD3P0DP91 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-727P-201ENST00000363592 107 ntBASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 RNU5F-3P-201ENST00000363767 117 ntBASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-1056P-201ENST00000383996 107 ntBASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 Y_RNA.525-201ENST00000384570 113 ntBASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 SCARNA8-201ENST00000515924 131 ntBASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 CYCSP23-201ENST00000519781 313 ntBASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 MIR3674-201ENST00000636576 68 ntBASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSB-PGBD3P0DP91 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 GABRG2-229ENST00000641017 3628 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-199P-201ENST00000362954 107 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-793P-201ENST00000384233 104 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 CBX3P9-201ENST00000402326 552 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 AIMP1P2-201ENST00000425294 312 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 AC007215.1-201ENST00000464893 276 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 RPL36AP48-201ENST00000485521 314 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-453P-201ENST00000516819 85 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 SNORD59.2-201ENST00000516873 68 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 AC005520.5-201ENST00000613926 164 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 AL137790.1-201ENST00000634283 177 ntBASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSB-PGBD3P0DP91 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-103P-201ENST00000363686 107 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 U3.40-201ENST00000408706 208 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 RPL23AP58-201ENST00000440453 469 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms