Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU6-199P-201ENST00000362954 107 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 SNORD116.1-201ENST00000365628 92 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 SNORA2A-201ENST00000383885 135 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 RNU6-116P-201ENST00000384042 109 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 MIR32-201ENST00000384965 70 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 MTATP6P20-201ENST00000414147 562 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 CDK8P2-201ENST00000415020 547 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 AC090960.1-201ENST00000421072 306 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.18□□□□□ -2.38
FREM3P0C091 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.18□□□□□ -2.38
FREM3P0C091 MTCO2P18-201ENST00000457151 658 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.18□□□□□ -2.38
FREM3P0C091 AC117522.1-201ENST00000509821 380 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.18□□□□□ -2.38
FREM3P0C091 MIR3118-1-201ENST00000581787 76 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 AC080078.2-201ENST00000603766 501 ntBASIC0.18□□□□□ -2.38
FREM3P0C091 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
FREM3P0C091 MIR103A2-201ENST00000362154 78 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU6-545P-201ENST00000362681 104 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNA5SP323-201ENST00000391094 133 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.17□□□□□ -2.38
FREM3P0C091 AC098869.1-201ENST00000481627 292 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU6-123P-201ENST00000516163 102 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU6-1003P-201ENST00000517099 105 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 AC105185.1-201ENST00000518705 535 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.17□□□□□ -2.38
FREM3P0C091 AC092354.1-201ENST00000606057 376 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 AC245060.5-201ENST00000610778 3293 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNY4P16-201ENST00000364768 94 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 Y_RNA.287-201ENST00000364853 94 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 Y_RNA.480-201ENST00000384364 102 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU6-1067P-201ENST00000384752 107 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU6-1106P-201ENST00000390845 107 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU2-72P-201ENST00000411175 163 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU6-607P-201ENST00000411283 108 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.17□□□□□ -2.38
FREM3P0C091 LRRC34P2-201ENST00000514850 553 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 SNORA70.12-201ENST00000516084 153 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 RNU1-142P-201ENST00000516682 145 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 AC023050.3-201ENST00000541142 333 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 AL162730.1-201ENST00000605734 292 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 AL359075.3-201ENST00000613288 217 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 AC008250.2-201ENST00000615261 205 ntBASIC0.17□□□□□ -2.38
FREM3P0C091 MIR208B-201ENST00000401172 77 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL022718.1-201ENST00000412004 84 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AC007283.2-201ENST00000424739 197 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL133396.1-201ENST00000432048 687 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AC002429.1-201ENST00000437672 148 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AC016717.1-201ENST00000448918 286 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AC022364.2-201ENST00000457963 554 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AF186996.7-201ENST00000492781 209 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 HMGB1P29-201ENST00000505659 499 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.16□□□□□ -2.38
FREM3P0C091 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.16□□□□□ -2.38
FREM3P0C091 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
FREM3P0C091 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.16□□□□□ -2.38
FREM3P0C091 MIR5697-201ENST00000578045 78 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 MTND3P19-201ENST00000603825 345 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL031667.3-201ENST00000620124 655 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
FREM3P0C091 Y_RNA.303-201ENST00000364998 94 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 MIR140-201ENST00000385282 100 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 SNORA12.1-201ENST00000390873 148 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL034345.1-201ENST00000407768 123 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 RNU6-1186P-201ENST00000410429 97 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.16□□□□□ -2.38
FREM3P0C091 AC010587.1-201ENST00000505809 469 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.16□□□□□ -2.38
FREM3P0C091 AC109479.2-201ENST00000517842 174 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 MTND4LP26-201ENST00000518144 282 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 MTND1P15-201ENST00000579262 949 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AC008521.1-201ENST00000587471 187 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL138726.1-201ENST00000614873 333 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL136221.1-201ENST00000621449 509 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL049777.1-201ENST00000622740 518 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 AL450472.1-202ENST00000637286 180 ntBASIC0.16□□□□□ -2.38
FREM3P0C091 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 RNU4-76P-201ENST00000364509 141 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 Y_RNA.504-201ENST00000384481 104 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 RNA5SP109-201ENST00000391010 116 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 AC073261.1-201ENST00000429409 121 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 AC119618.1-201ENST00000434191 222 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 AC022616.6-201ENST00000520479 119 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.15□□□□□ -2.39
FREM3P0C091 AC025627.3-201ENST00000582078 182 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 AC064872.1-201ENST00000604823 1072 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 AC007014.2-201ENST00000615581 479 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 uc_338.22-201ENST00000622722 187 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 AC126544.2-201ENST00000625174 749 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 snoZ196.1-201ENST00000625269 89 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 MIR6516-201ENST00000630554 81 ntBASIC0.15□□□□□ -2.39
FREM3P0C091 MTND4P4-201ENST00000439033 1366 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 RNU6-428P-201ENST00000362942 107 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 RNU6-336P-201ENST00000364891 107 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 RPS27AP14-201ENST00000422868 454 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 STAG3L5P-204ENST00000443759 179 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 AC104982.1-201ENST00000478775 574 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 AC091435.1-201ENST00000505442 584 ntBASIC0.14□□□□□ -2.39
FREM3P0C091 RNU6-276P-201ENST00000516114 96 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms