Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.54□□□□□ -2
HOXC6P09630 RPL23AP42-201ENST00000471152 471 ntBASIC2.54□□□□□ -2
HOXC6P09630 AP000870.1-201ENST00000472927 406 ntBASIC2.54□□□□□ -2
HOXC6P09630 RAC1P5-201ENST00000512182 576 ntBASIC2.54□□□□□ -2
HOXC6P09630 RNU6-911P-201ENST00000516523 104 ntBASIC2.54□□□□□ -2
HOXC6P09630 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.54□□□□□ -2
HOXC6P09630 AL442163.3-201ENST00000554110 156 ntBASIC2.54□□□□□ -2
HOXC6P09630 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.54□□□□□ -2
HOXC6P09630 MIR3529-201ENST00000637713 78 ntBASIC2.54□□□□□ -2
HOXC6P09630 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
HOXC6P09630 RNU6-529P-201ENST00000363383 104 ntBASIC2.53□□□□□ -2
HOXC6P09630 RNU1-105P-201ENST00000363470 161 ntBASIC2.53□□□□□ -2
HOXC6P09630 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
HOXC6P09630 Y_RNA.376-201ENST00000365638 108 ntBASIC2.53□□□□□ -2
HOXC6P09630 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
HOXC6P09630 RNU6-472P-201ENST00000384299 107 ntBASIC2.53□□□□□ -2
HOXC6P09630 MIR549A-201ENST00000385268 96 ntBASIC2.53□□□□□ -2
HOXC6P09630 RNU2-20P-201ENST00000410425 191 ntBASIC2.53□□□□□ -2
HOXC6P09630 EIF1AXP1-201ENST00000419267 435 ntBASIC2.53□□□□□ -2
HOXC6P09630 WARS2P1-201ENST00000429678 537 ntBASIC2.53□□□□□ -2
HOXC6P09630 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.53□□□□□ -2
HOXC6P09630 AC244670.1-201ENST00000436879 112 ntBASIC2.53□□□□□ -2
HOXC6P09630 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXC6P09630 FCF1P4-201ENST00000448326 183 ntBASIC2.53□□□□□ -2
HOXC6P09630 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
HOXC6P09630 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.53□□□□□ -2
HOXC6P09630 SNORA31.16-201ENST00000516773 139 ntBASIC2.53□□□□□ -2
HOXC6P09630 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
HOXC6P09630 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.53□□□□□ -2
HOXC6P09630 AC090897.2-201ENST00000581715 130 ntBASIC2.53□□□□□ -2
HOXC6P09630 AL078605.1-201ENST00000603529 500 ntBASIC2.53□□□□□ -2
HOXC6P09630 AL359198.2-201ENST00000611836 194 ntBASIC2.53□□□□□ -2
HOXC6P09630 AC011476.5-201ENST00000615594 130 ntBASIC2.53□□□□□ -2
HOXC6P09630 AL353997.5-201ENST00000618886 171 ntBASIC2.53□□□□□ -2
HOXC6P09630 U6.92-201ENST00000636464 89 ntBASIC2.53□□□□□ -2
HOXC6P09630 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.53□□□□□ -2
HOXC6P09630 AC010889.1-201ENST00000566193 2666 ntBASIC2.53□□□□□ -2.01
HOXC6P09630 AL356292.1-201ENST00000283110 373 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RNU6-1301P-201ENST00000362724 104 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RNU6-1285P-201ENST00000363480 105 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RNU6-1141P-201ENST00000364520 107 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RNU6-142P-201ENST00000384019 107 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 SNORA67.3-201ENST00000384366 140 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 Y_RNA.483-201ENST00000384380 101 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 Y_RNA.526-201ENST00000384572 110 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RNU2-25P-201ENST00000411041 191 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RPL21P38-201ENST00000418090 167 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 PTGES3P4-201ENST00000426243 356 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 LINC01399-202ENST00000458450 244 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 SNORA40.15-201ENST00000516884 107 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RNU6-1271P-201ENST00000517049 105 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 RNU6-570P-201ENST00000517051 105 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 AC026241.1-201ENST00000517873 2142 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 AC034114.1-201ENST00000520293 285 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 UBL5P4-201ENST00000562584 236 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 AC090617.3-201ENST00000573670 475 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC6P09630 AL356575.1-201ENST00000603008 283 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 AC073410.2-201ENST00000603240 332 ntBASIC2.52□□□□□ -2.01
HOXC6P09630 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HOXC6P09630 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HOXC6P09630 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 Y_RNA.27-201ENST00000362540 103 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 RNU1-76P-201ENST00000362903 159 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 Y_RNA.188-201ENST00000363952 111 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 Y_RNA.307-201ENST00000365022 117 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 RNU6-926P-201ENST00000384075 107 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 U8.10-201ENST00000384260 133 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 Y_RNA.461-201ENST00000384263 103 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 RNU6-713P-201ENST00000384761 107 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 MIR215-201ENST00000384858 110 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 U8.13-201ENST00000390842 128 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 SNORA11.4-201ENST00000408823 129 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 RNA5SP390-201ENST00000410191 113 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC6P09630 AC016700.2-201ENST00000446011 156 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 RPS27P26-201ENST00000494583 239 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 CKS1BP2-201ENST00000497342 240 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 AC016632.1-201ENST00000503994 196 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 Y_RNA.668-201ENST00000516233 93 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC6P09630 MIR5571-201ENST00000577998 113 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 AC062037.2-201ENST00000610137 73 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 MIR3670-4-201ENST00000612260 65 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 AC009831.4-201ENST00000620744 325 ntBASIC2.51□□□□□ -2.01
HOXC6P09630 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC6P09630 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC6P09630 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC6P09630 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
HOXC6P09630 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HOXC6P09630 Y_RNA.40-201ENST00000362645 93 ntBASIC2.5□□□□□ -2.01
HOXC6P09630 RNA5SP361-201ENST00000362686 118 ntBASIC2.5□□□□□ -2.01
HOXC6P09630 Y_RNA.143-201ENST00000363520 106 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms