Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RPS26P42-201ENST00000413485 326 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.31□□□□□ -2.2
MRPL3P09001 AL353572.1-201ENST00000442490 417 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.31□□□□□ -2.2
MRPL3P09001 AL513124.1-201ENST00000450410 614 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.31□□□□□ -2.2
MRPL3P09001 SNORD5.1-201ENST00000458800 75 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AC114801.2-201ENST00000503825 781 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 RNU7-30P-201ENST00000516835 62 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.31□□□□□ -2.2
MRPL3P09001 MIR5696-201ENST00000578474 85 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 CYP2C61P-201ENST00000604072 290 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AC025754.2-201ENST00000606491 432 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.31□□□□□ -2.2
MRPL3P09001 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MRPL3P09001 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MRPL3P09001 RNU1-58P-201ENST00000362413 163 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNU6-845P-201ENST00000362578 103 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNU1-62P-201ENST00000362599 164 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 Y_RNA.48-201ENST00000362710 103 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNU1-76P-201ENST00000362903 159 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNU1-42P-201ENST00000364033 160 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 Y_RNA.303-201ENST00000364998 94 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 Y_RNA.332-201ENST00000365271 113 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 SNORA18.2-201ENST00000383865 132 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNU6-767P-201ENST00000384132 107 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNU6-1013P-201ENST00000384180 107 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 SRIP3-201ENST00000413200 219 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL3P09001 AC138393.2-201ENST00000414742 246 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.3□□□□□ -2.2
MRPL3P09001 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL3P09001 AC243428.1-201ENST00000421099 264 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL3P09001 RPS3AP52-201ENST00000435639 297 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 HMGB1P18-201ENST00000438801 619 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MRPL3P09001 OR2AQ1P-201ENST00000451972 200 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL3P09001 MTND4P17-201ENST00000470444 350 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RPL30P10-201ENST00000488148 337 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 AC026782.1-201ENST00000512952 449 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNU6-567P-201ENST00000516746 107 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 RNA5SP490-201ENST00000517141 136 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 AC090517.1-201ENST00000569307 266 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
MRPL3P09001 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.3□□□□□ -2.2
MRPL3P09001 AC022513.1-201ENST00000624512 117 ntBASIC1.3□□□□□ -2.2
MRPL3P09001 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MRPL3P09001 MTND5P9-201ENST00000503854 1755 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
MRPL3P09001 SNORD81.2-201ENST00000365153 76 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 RNU6-596P-201ENST00000365395 98 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 MIR934-201ENST00000401241 83 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 RPL21P111-201ENST00000418453 477 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 SNRPEP8-201ENST00000442866 260 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AL035666.1-201ENST00000446195 348 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 MTCO3P8-201ENST00000453691 755 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.29□□□□□ -2.2
MRPL3P09001 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.29□□□□□ -2.2
MRPL3P09001 HMGN1P12-201ENST00000499125 195 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AC103851.1-201ENST00000506833 274 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AC116337.1-201ENST00000509680 687 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 RNU1-41P-201ENST00000516161 162 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 Y_RNA.670-201ENST00000516255 105 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 RNU1-48P-201ENST00000516400 162 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 SNORA20.3-201ENST00000516880 132 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 CBX3P8-201ENST00000532412 525 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.29□□□□□ -2.2
MRPL3P09001 AP001485.1-201ENST00000604799 199 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AC018462.2-201ENST00000605375 395 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AP000654.2-201ENST00000605633 586 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AC022306.2-201ENST00000617563 647 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.29□□□□□ -2.2
MRPL3P09001 SCARNA4-201ENST00000629045 128 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.29□□□□□ -2.2
MRPL3P09001 AC099654.14-201ENST00000638599 341 ntBASIC1.29□□□□□ -2.2
MRPL3P09001 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
MRPL3P09001 Y_RNA.88-201ENST00000363029 99 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 Y_RNA.99-201ENST00000363138 105 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 Y_RNA.166-201ENST00000363730 102 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.28□□□□□ -2.2
MRPL3P09001 Y_RNA.404-201ENST00000383978 102 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 MIR30A-201ENST00000385092 71 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 MIR517C-201ENST00000385103 95 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 RN7SKP284-201ENST00000411002 343 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 AC009310.1-201ENST00000414414 451 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.28□□□□□ -2.2
MRPL3P09001 RNU7-14P-201ENST00000459331 62 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 AC007215.1-201ENST00000464893 276 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 AC116353.2-201ENST00000505332 712 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.28□□□□□ -2.2
MRPL3P09001 AC046134.1-201ENST00000514454 666 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 ACA59.1-201ENST00000515966 143 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 RNVU1-2-201ENST00000516326 135 ntBASIC1.28□□□□□ -2.2
MRPL3P09001 AC087441.2-201ENST00000529141 262 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms