Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.01□□□□□ -2.25
MT-ND4P03905 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.01□□□□□ -2.25
MT-ND4P03905 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
MT-ND4P03905 SNORA7.1-201ENST00000363750 139 ntBASIC1□□□□□ -2.25
MT-ND4P03905 RNU6-1322P-201ENST00000364309 107 ntBASIC1□□□□□ -2.25
MT-ND4P03905 MIR521-1-201ENST00000384902 87 ntBASIC1□□□□□ -2.25
MT-ND4P03905 MIR487A-201ENST00000385009 80 ntBASIC1□□□□□ -2.25
MT-ND4P03905 MIR450B-201ENST00000401182 78 ntBASIC1□□□□□ -2.25
MT-ND4P03905 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1□□□□□ -2.25
MT-ND4P03905 HMGN2P34-201ENST00000437647 269 ntBASIC1□□□□□ -2.25
MT-ND4P03905 AC069257.2-201ENST00000441819 155 ntBASIC1□□□□□ -2.25
MT-ND4P03905 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1□□□□□ -2.25
MT-ND4P03905 AC009474.2-201ENST00000451383 136 ntBASIC1□□□□□ -2.25
MT-ND4P03905 snoU13.23-201ENST00000458863 104 ntBASIC1□□□□□ -2.25
MT-ND4P03905 RNU7-95P-201ENST00000459222 64 ntBASIC1□□□□□ -2.25
MT-ND4P03905 AC007215.1-201ENST00000464893 276 ntBASIC1□□□□□ -2.25
MT-ND4P03905 RNU6-835P-201ENST00000516974 104 ntBASIC1□□□□□ -2.25
MT-ND4P03905 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1□□□□□ -2.25
MT-ND4P03905 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1□□□□□ -2.25
MT-ND4P03905 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1□□□□□ -2.25
MT-ND4P03905 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1□□□□□ -2.25
MT-ND4P03905 MIR3937-201ENST00000580135 106 ntBASIC1□□□□□ -2.25
MT-ND4P03905 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
MT-ND4P03905 AC023043.2-201ENST00000589678 1026 ntBASIC1□□□□□ -2.25
MT-ND4P03905 FAM157A-202ENST00000615155 405 ntBASIC1□□□□□ -2.25
MT-ND4P03905 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1□□□□□ -2.25
MT-ND4P03905 MTND5P35-201ENST00000557537 1720 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 AP000568.1-201ENST00000282964 442 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 snoU2-30.2-201ENST00000362805 70 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 RNU6-1305P-201ENST00000364353 104 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 MIR514A2-201ENST00000385131 88 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 MIR514A3-201ENST00000385132 88 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 SNORA11.2-201ENST00000408318 127 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.99□□□□□ -2.25
MT-ND4P03905 AC091885.1-201ENST00000506658 268 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 RNU6-1332P-201ENST00000516666 104 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 AL158211.1-201ENST00000566763 763 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.99□□□□□ -2.25
MT-ND4P03905 MTND1P15-201ENST00000579262 949 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 RN7SKP299-201ENST00000606679 301 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 MIR8076-201ENST00000611401 83 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 AC006001.4-201ENST00000622243 395 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 AL359697.1-201ENST00000624879 587 ntBASIC0.99□□□□□ -2.25
MT-ND4P03905 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
MT-ND4P03905 Y_RNA.287-201ENST00000364853 94 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 RNU6-214P-201ENST00000384130 107 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 RNU6-784P-201ENST00000384330 106 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 RNU6-1119P-201ENST00000384349 108 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 RNU6-417P-201ENST00000384712 107 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 MIR513A1-201ENST00000385138 129 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
MT-ND4P03905 EIF4E2P1-201ENST00000393781 255 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 RNU6-648P-201ENST00000410190 107 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.98□□□□□ -2.25
MT-ND4P03905 AC114982.1-201ENST00000469402 321 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 AC108210.2-201ENST00000503681 201 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 MTND1P35-201ENST00000526739 508 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.98□□□□□ -2.25
MT-ND4P03905 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.98□□□□□ -2.25
MT-ND4P03905 MIR4742-201ENST00000581069 85 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 AC100830.2-201ENST00000581636 240 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.98□□□□□ -2.25
MT-ND4P03905 AL353997.5-201ENST00000618886 171 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 SCARNA4-201ENST00000629045 128 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 MIR6863-201ENST00000636112 90 ntBASIC0.98□□□□□ -2.25
MT-ND4P03905 MTND4P5-201ENST00000435821 1374 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 SNORD33-201ENST00000362761 85 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 RNU6-522P-201ENST00000364497 107 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 SNORA67.2-201ENST00000384300 149 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 MIR586-201ENST00000385035 97 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 RNA5SP467-201ENST00000391274 118 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.97□□□□□ -2.25
MT-ND4P03905 RNU6-57P-201ENST00000411348 103 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 AC004965.1-201ENST00000413033 213 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 COX6CP10-201ENST00000416832 224 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 EIF1P1-201ENST00000421436 341 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.97□□□□□ -2.25
MT-ND4P03905 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.97□□□□□ -2.25
MT-ND4P03905 RNU7-57P-201ENST00000459540 60 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 AC083904.1-201ENST00000487828 231 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 RPL23AP75-201ENST00000491601 451 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 MTCO1P29-201ENST00000496868 288 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.97□□□□□ -2.25
MT-ND4P03905 AL133373.1-201ENST00000497098 94 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 MIR4709-201ENST00000577272 72 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 MIR3611-201ENST00000584484 83 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 AC146944.4-201ENST00000602697 718 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 SNRPGP20-201ENST00000604477 205 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 AL365434.2-201ENST00000607979 234 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.97□□□□□ -2.25
MT-ND4P03905 MTND5P26-201ENST00000426018 1752 ntBASIC0.97□□□□□ -2.25
MT-ND4P03905 ZNF204P-201ENST00000416749 2397 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 RNU6-534P-201ENST00000364877 106 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 SNORA72.2-201ENST00000365028 127 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 Y_RNA.481-201ENST00000384373 102 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AF228730.1-201ENST00000397972 663 ntBASIC0.96□□□□□ -2.26
MT-ND4P03905 AC016909.1-201ENST00000415916 166 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms