Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MT-ND1P03886 U3.9-201ENST00000363823 204 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 Y_RNA.259-201ENST00000364619 101 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 MT-TD-201ENST00000387419 68 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 SNORA12.2-201ENST00000391040 156 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 MIR1283-2-201ENST00000408621 87 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 AC004866.1-201ENST00000411748 78 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND1P03886 AC096638.1-201ENST00000444678 216 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 ELOCP24-201ENST00000456370 334 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.8□□□□□ -2.12
MT-ND1P03886 TOMM22P6-201ENST00000465035 409 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 RPL23AP42-201ENST00000471152 471 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.8□□□□□ -2.12
MT-ND1P03886 ANXA2P1-201ENST00000505539 926 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
MT-ND1P03886 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 Y_RNA.675-201ENST00000516389 149 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.8□□□□□ -2.12
MT-ND1P03886 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND1P03886 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MT-ND1P03886 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
MT-ND1P03886 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
MT-ND1P03886 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.79□□□□□ -2.12
MT-ND1P03886 RNY1P16-201ENST00000363063 111 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 RNU6-743P-201ENST00000364151 106 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 RNU6-17P-201ENST00000384245 107 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 RNU6-18P-201ENST00000384527 107 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 SNORA8-201ENST00000384574 139 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 RNU11-3P-201ENST00000391111 133 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 SNORA75.6-201ENST00000391318 127 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 RNA5SP425-201ENST00000410336 112 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 AC022028.1-201ENST00000412054 408 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.79□□□□□ -2.12
MT-ND1P03886 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND1P03886 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 AL445646.1-201ENST00000431784 216 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 AL445305.1-201ENST00000432577 575 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 HMGN2P3-201ENST00000433603 273 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 HMGN2P5-201ENST00000436882 273 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
MT-ND1P03886 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.79□□□□□ -2.12
MT-ND1P03886 RNU7-152P-201ENST00000458982 64 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 Y_RNA.653-201ENST00000459091 95 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 AC007215.1-201ENST00000464893 276 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 ATP5EP1-201ENST00000510257 156 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 AL590705.4-201ENST00000532209 134 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 AC027288.2-201ENST00000553028 243 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND1P03886 AL355802.3-201ENST00000607571 545 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 U1.36-201ENST00000620684 176 ntBASIC1.79□□□□□ -2.12
MT-ND1P03886 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MT-ND1P03886 SNORD115-32-201ENST00000364079 82 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 RNU6-99P-201ENST00000364721 107 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 SNORA18.2-201ENST00000383865 132 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 RNU6-26P-201ENST00000383985 107 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 Y_RNA.419-201ENST00000384041 102 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 MTCYBP4-201ENST00000401524 249 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 MIR1294-201ENST00000408503 142 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 Z98742.3-201ENST00000418637 326 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND1P03886 AL035666.1-201ENST00000446195 348 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND1P03886 AC022493.2-201ENST00000506122 481 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 RNU6-1098P-201ENST00000516772 96 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND1P03886 AC090517.1-201ENST00000569307 266 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 AC104581.2-201ENST00000572227 430 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND1P03886 CYP2C61P-201ENST00000604072 290 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 RMST_6.1-201ENST00000611980 203 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 AL590808.1-201ENST00000618696 141 ntBASIC1.78□□□□□ -2.12
MT-ND1P03886 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
MT-ND1P03886 RNU1-58P-201ENST00000362413 163 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 Y_RNA.61-201ENST00000362835 102 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 Y_RNA.99-201ENST00000363138 105 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RNU6-234P-201ENST00000365229 104 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 MIR559-201ENST00000385188 96 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 MIR634-201ENST00000385208 97 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MT-ND1P03886 AL033519.2-201ENST00000403958 392 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RN7SKP223-201ENST00000410582 62 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MT-ND1P03886 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 DPH3P2-201ENST00000422618 250 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RN7SKP210-201ENST00000459176 261 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RPL17P19-201ENST00000489069 552 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.77□□□□□ -2.13
MT-ND1P03886 AC093303.1-201ENST00000514549 295 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RNU7-175P-201ENST00000515915 61 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RNU6-470P-201ENST00000515954 104 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 RNU6-58P-201ENST00000517143 103 ntBASIC1.77□□□□□ -2.13
MT-ND1P03886 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.77□□□□□ -2.13
MT-ND1P03886 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms