Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.61□□□□□ -2.15
TIMP1P01033 RNU6-965P-201ENST00000516721 96 ntBASIC1.61□□□□□ -2.15
TIMP1P01033 RNA5SP480-201ENST00000516840 109 ntBASIC1.61□□□□□ -2.15
TIMP1P01033 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.61□□□□□ -2.15
TIMP1P01033 AP005639.2-201ENST00000527592 928 ntBASIC1.61□□□□□ -2.15
TIMP1P01033 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TIMP1P01033 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.61□□□□□ -2.15
TIMP1P01033 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
TIMP1P01033 FGF7P1-201ENST00000582820 288 ntBASIC1.61□□□□□ -2.15
TIMP1P01033 MIR6078-201ENST00000611069 100 ntBASIC1.61□□□□□ -2.15
TIMP1P01033 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
TIMP1P01033 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
TIMP1P01033 Y_RNA.151-201ENST00000363566 112 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 U3.9-201ENST00000363823 204 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 Y_RNA.248-201ENST00000364501 109 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 RNU6-1286P-201ENST00000383871 107 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 SNORA29-201ENST00000384183 140 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 RNU6-784P-201ENST00000384330 106 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 RNU6-790P-201ENST00000384479 105 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TIMP1P01033 SNORA12-201ENST00000391162 147 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.6□□□□□ -2.15
TIMP1P01033 AL353572.1-201ENST00000442490 417 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.6□□□□□ -2.15
TIMP1P01033 AC021146.2-201ENST00000504736 556 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 RNU6-1088P-201ENST00000516850 104 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.6□□□□□ -2.15
TIMP1P01033 EIF4A1P12-201ENST00000551910 141 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.6□□□□□ -2.15
TIMP1P01033 MIR3976-201ENST00000606807 139 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.6□□□□□ -2.15
TIMP1P01033 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
TIMP1P01033 MTND4P5-201ENST00000435821 1374 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 MIR96-201ENST00000362288 78 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 RNU5B-2P-201ENST00000363036 113 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 Y_RNA.301-201ENST00000364990 103 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 RNU6-26P-201ENST00000383985 107 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 RNU6-968P-201ENST00000384076 107 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 RNU6-378P-201ENST00000384324 107 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TIMP1P01033 SRIP3-201ENST00000413200 219 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 RPL30P16-201ENST00000419341 429 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 DAP3P1-201ENST00000441522 278 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.59□□□□□ -2.15
TIMP1P01033 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.59□□□□□ -2.15
TIMP1P01033 RNU4-49P-201ENST00000516080 140 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 RNU6-566P-201ENST00000516790 107 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 RNA5SP454-201ENST00000517231 127 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.59□□□□□ -2.15
TIMP1P01033 AC109446.1-201ENST00000566172 220 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.59□□□□□ -2.15
TIMP1P01033 POLR3GP2-201ENST00000588366 668 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 AP000654.2-201ENST00000605633 586 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 AC009994.1-201ENST00000606889 253 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 AL022345.1-201ENST00000607292 135 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 AC009248.2-201ENST00000619826 254 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 MIR1248-201ENST00000629190 106 ntBASIC1.59□□□□□ -2.15
TIMP1P01033 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TIMP1P01033 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TIMP1P01033 Y_RNA.72-201ENST00000362894 103 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 MIR517A-201ENST00000385001 87 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 MIR208B-201ENST00000401172 77 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AL356776.1-201ENST00000406574 447 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 MTCO3P46-201ENST00000425787 232 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.58□□□□□ -2.16
TIMP1P01033 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.58□□□□□ -2.16
TIMP1P01033 AC245102.2-201ENST00000448956 180 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.58□□□□□ -2.16
TIMP1P01033 PRELID3BP1-201ENST00000457142 540 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 RNU6-329P-201ENST00000459618 107 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 MTCO2P30-201ENST00000503662 364 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AC005741.1-201ENST00000511094 432 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 RNU6-273P-201ENST00000516937 96 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.58□□□□□ -2.16
TIMP1P01033 MRPS36P4-201ENST00000534436 298 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.58□□□□□ -2.16
TIMP1P01033 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.58□□□□□ -2.16
TIMP1P01033 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.58□□□□□ -2.16
TIMP1P01033 RPL17P51-201ENST00000605218 238 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AC124303.1-201ENST00000605703 360 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AC019193.3-201ENST00000609144 554 ntBASIC1.58□□□□□ -2.16
TIMP1P01033 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
TIMP1P01033 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
TIMP1P01033 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TIMP1P01033 RNU6-743P-201ENST00000364151 106 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 RNU6-234P-201ENST00000365229 104 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 AL357139.1-201ENST00000407792 426 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 RNA5SP494-201ENST00000410653 129 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 RPS26P42-201ENST00000413485 326 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 RPL31P63-201ENST00000422565 375 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 MTND1P2-201ENST00000430604 821 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.57□□□□□ -2.16
TIMP1P01033 RPS4XP11-201ENST00000446897 772 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 MTND1P17-201ENST00000448961 204 ntBASIC1.57□□□□□ -2.16
TIMP1P01033 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.57□□□□□ -2.16
TIMP1P01033 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.57□□□□□ -2.16
TIMP1P01033 AC018710.1-201ENST00000506509 158 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms