Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 Y_RNA.533-201ENST00000384596 114 ntBASIC2.25□□□□□ -2.05
DDX58O95786 RNA5SP213-201ENST00000391031 106 ntBASIC2.25□□□□□ -2.05
DDX58O95786 AC138393.2-201ENST00000414742 246 ntBASIC2.25□□□□□ -2.05
DDX58O95786 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
DDX58O95786 MTND2P29-201ENST00000438595 412 ntBASIC2.25□□□□□ -2.05
DDX58O95786 AC098614.3-201ENST00000438957 440 ntBASIC2.25□□□□□ -2.05
DDX58O95786 TOMM22P6-201ENST00000465035 409 ntBASIC2.25□□□□□ -2.05
DDX58O95786 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.25□□□□□ -2.05
DDX58O95786 RNU6-1016P-201ENST00000516689 94 ntBASIC2.25□□□□□ -2.05
DDX58O95786 AC026470.2-201ENST00000561492 181 ntBASIC2.25□□□□□ -2.05
DDX58O95786 MIR3683-201ENST00000580847 82 ntBASIC2.25□□□□□ -2.05
DDX58O95786 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.25□□□□□ -2.05
DDX58O95786 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.25□□□□□ -2.05
DDX58O95786 AL590240.4-201ENST00000616908 390 ntBASIC2.25□□□□□ -2.05
DDX58O95786 AL162373.1-201ENST00000620433 407 ntBASIC2.25□□□□□ -2.05
DDX58O95786 RNU1-17P-201ENST00000363022 152 ntBASIC2.24□□□□□ -2.05
DDX58O95786 Y_RNA.184-201ENST00000363884 108 ntBASIC2.24□□□□□ -2.05
DDX58O95786 RNA5SP493-201ENST00000364115 91 ntBASIC2.24□□□□□ -2.05
DDX58O95786 Y_RNA.390-201ENST00000383932 102 ntBASIC2.24□□□□□ -2.05
DDX58O95786 SNORA51.11-201ENST00000384442 131 ntBASIC2.24□□□□□ -2.05
DDX58O95786 RNU6-541P-201ENST00000384709 110 ntBASIC2.24□□□□□ -2.05
DDX58O95786 MIR487A-201ENST00000385009 80 ntBASIC2.24□□□□□ -2.05
DDX58O95786 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
DDX58O95786 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
DDX58O95786 RNU6-1050P-201ENST00000410388 107 ntBASIC2.24□□□□□ -2.05
DDX58O95786 AC139712.2-201ENST00000424302 339 ntBASIC2.24□□□□□ -2.05
DDX58O95786 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.24□□□□□ -2.05
DDX58O95786 AC004386.2-201ENST00000441858 148 ntBASIC2.24□□□□□ -2.05
DDX58O95786 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.24□□□□□ -2.05
DDX58O95786 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.24□□□□□ -2.05
DDX58O95786 SNORD5.1-201ENST00000458800 75 ntBASIC2.24□□□□□ -2.05
DDX58O95786 snoU13.30-201ENST00000458951 104 ntBASIC2.24□□□□□ -2.05
DDX58O95786 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.24□□□□□ -2.05
DDX58O95786 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.24□□□□□ -2.05
DDX58O95786 MIR3935-201ENST00000583472 104 ntBASIC2.24□□□□□ -2.05
DDX58O95786 SNRPGP20-201ENST00000604477 205 ntBASIC2.24□□□□□ -2.05
DDX58O95786 AC018462.2-201ENST00000605375 395 ntBASIC2.24□□□□□ -2.05
DDX58O95786 RMST_6.1-201ENST00000611980 203 ntBASIC2.24□□□□□ -2.05
DDX58O95786 PISRT1.1-201ENST00000616930 107 ntBASIC2.24□□□□□ -2.05
DDX58O95786 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.24□□□□□ -2.05
DDX58O95786 AL359697.1-201ENST00000624879 587 ntBASIC2.24□□□□□ -2.05
DDX58O95786 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.24□□□□□ -2.05
DDX58O95786 ZNF204P-201ENST00000416749 2397 ntBASIC2.24□□□□□ -2.05
DDX58O95786 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
DDX58O95786 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
DDX58O95786 RNU1-76P-201ENST00000362903 159 ntBASIC2.23□□□□□ -2.05
DDX58O95786 RNU6-596P-201ENST00000365395 98 ntBASIC2.23□□□□□ -2.05
DDX58O95786 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.23□□□□□ -2.05
DDX58O95786 RNU6-842P-201ENST00000384269 107 ntBASIC2.23□□□□□ -2.05
DDX58O95786 AL627390.1-201ENST00000396055 340 ntBASIC2.23□□□□□ -2.05
DDX58O95786 RNU6-174P-201ENST00000410406 106 ntBASIC2.23□□□□□ -2.05
DDX58O95786 RPS26P42-201ENST00000413485 326 ntBASIC2.23□□□□□ -2.05
DDX58O95786 MTND3P10-201ENST00000450967 341 ntBASIC2.23□□□□□ -2.05
DDX58O95786 RPL23AP3-201ENST00000453844 468 ntBASIC2.23□□□□□ -2.05
DDX58O95786 RNA5SP233-201ENST00000459153 113 ntBASIC2.23□□□□□ -2.05
DDX58O95786 AC026782.1-201ENST00000512952 449 ntBASIC2.23□□□□□ -2.05
DDX58O95786 RNU7-175P-201ENST00000515915 61 ntBASIC2.23□□□□□ -2.05
DDX58O95786 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
DDX58O95786 Y_RNA.708-201ENST00000516950 96 ntBASIC2.23□□□□□ -2.05
DDX58O95786 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.23□□□□□ -2.05
DDX58O95786 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.23□□□□□ -2.05
DDX58O95786 AC010928.2-201ENST00000588017 287 ntBASIC2.23□□□□□ -2.05
DDX58O95786 AL773524.1-201ENST00000614065 229 ntBASIC2.23□□□□□ -2.05
DDX58O95786 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.23□□□□□ -2.05
DDX58O95786 AC022306.2-201ENST00000617563 647 ntBASIC2.23□□□□□ -2.05
DDX58O95786 TPTEP1-208ENST00000636884 213 ntBASIC2.23□□□□□ -2.05
DDX58O95786 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
DDX58O95786 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.23□□□□□ -2.05
DDX58O95786 RNU6-545P-201ENST00000362681 104 ntBASIC2.22□□□□□ -2.05
DDX58O95786 Y_RNA.88-201ENST00000363029 99 ntBASIC2.22□□□□□ -2.05
DDX58O95786 RNU6-593P-201ENST00000364716 112 ntBASIC2.22□□□□□ -2.05
DDX58O95786 SNORD81.2-201ENST00000365153 76 ntBASIC2.22□□□□□ -2.05
DDX58O95786 Y_RNA.482-201ENST00000384377 111 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR153-2-201ENST00000385225 87 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR676-201ENST00000390702 67 ntBASIC2.22□□□□□ -2.05
DDX58O95786 RNA5SP212-201ENST00000391223 107 ntBASIC2.22□□□□□ -2.05
DDX58O95786 AL356432.1-201ENST00000405809 419 ntBASIC2.22□□□□□ -2.05
DDX58O95786 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.22□□□□□ -2.05
DDX58O95786 Y_RNA.594-201ENST00000410373 140 ntBASIC2.22□□□□□ -2.05
DDX58O95786 AL356379.1-201ENST00000414105 126 ntBASIC2.22□□□□□ -2.05
DDX58O95786 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.22□□□□□ -2.05
DDX58O95786 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
DDX58O95786 PDCL2P1-201ENST00000419302 352 ntBASIC2.22□□□□□ -2.05
DDX58O95786 HMGN2P19-201ENST00000425149 265 ntBASIC2.22□□□□□ -2.05
DDX58O95786 RPL23AP50-201ENST00000434149 455 ntBASIC2.22□□□□□ -2.05
DDX58O95786 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.22□□□□□ -2.05
DDX58O95786 AC007395.1-201ENST00000451333 677 ntBASIC2.22□□□□□ -2.05
DDX58O95786 AC116353.2-201ENST00000505332 712 ntBASIC2.22□□□□□ -2.05
DDX58O95786 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.22□□□□□ -2.05
DDX58O95786 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.22□□□□□ -2.05
DDX58O95786 SNORA20.3-201ENST00000516880 132 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR4419B-201ENST00000577260 68 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR4299-201ENST00000577899 72 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR5696-201ENST00000578474 85 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR4255-201ENST00000579351 72 ntBASIC2.22□□□□□ -2.05
DDX58O95786 AC005730.3-201ENST00000583067 366 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR4753-201ENST00000585119 83 ntBASIC2.22□□□□□ -2.05
DDX58O95786 AC009229.3-201ENST00000608056 282 ntBASIC2.22□□□□□ -2.05
DDX58O95786 MIR8081-201ENST00000611533 95 ntBASIC2.22□□□□□ -2.05
DDX58O95786 TCL6_2.1-201ENST00000615162 119 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms