Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNU4-15P-201ENST00000362613 141 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 MIR520G-201ENST00000385064 90 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 MIR520H-201ENST00000385126 88 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.77□□□□□ -2.53
POLR1AO95602 MTND4P32-201ENST00000437189 1237 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 MTND4P25-201ENST00000441039 533 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 AL606517.2-201ENST00000442855 241 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 AL133217.1-201ENST00000450980 425 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 MRPL42P4-201ENST00000453267 443 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 TPT1P7-201ENST00000458300 517 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 RNU6-714P-201ENST00000516963 103 ntBASIC-0.77□□□□□ -2.53
POLR1AO95602 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
POLR1AO95602 SMIM11P1-201ENST00000369586 178 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 RNU6-417P-201ENST00000384712 107 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.78□□□□□ -2.53
POLR1AO95602 AC119618.1-201ENST00000434191 222 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.78□□□□□ -2.53
POLR1AO95602 AL139824.2-201ENST00000458731 1095 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 snoU109.2-201ENST00000459316 135 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 AC109445.1-201ENST00000512356 383 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 RNU6-917P-201ENST00000516294 104 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 SNORA31.10-201ENST00000516482 106 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 AL096861.1-201ENST00000610899 123 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 SNORA8.2-201ENST00000384372 139 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 SNORD83.1-201ENST00000411362 77 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.78□□□□□ -2.53
POLR1AO95602 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.78□□□□□ -2.53
POLR1AO95602 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.78□□□□□ -2.53
POLR1AO95602 U8.21-201ENST00000459536 136 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 AC023538.1-201ENST00000534576 736 ntBASIC-0.78□□□□□ -2.53
POLR1AO95602 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.78□□□□□ -2.53
POLR1AO95602 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.78□□□□□ -2.53
POLR1AO95602 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.78□□□□□ -2.54
POLR1AO95602 RNU6-652P-201ENST00000365488 107 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 MIR587-201ENST00000384845 96 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 MIR301A-201ENST00000385261 86 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
POLR1AO95602 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.79□□□□□ -2.54
POLR1AO95602 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.79□□□□□ -2.54
POLR1AO95602 AC087499.4-201ENST00000448505 178 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 MIR1273C-201ENST00000578669 77 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 MIR4436A-201ENST00000585278 85 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 BCRP9-201ENST00000605312 388 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 AC112487.2-201ENST00000637950 304 ntBASIC-0.79□□□□□ -2.54
POLR1AO95602 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 AC083799.1-201ENST00000366451 910 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 SNORA32.2-201ENST00000384049 122 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 MIR196A1-201ENST00000388006 70 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 MIR1207-201ENST00000408249 87 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 AL627311.1-201ENST00000431514 115 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 COX7BP2-201ENST00000437976 242 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 RNU6-977P-201ENST00000516411 103 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 DEFB131D-201ENST00000526803 184 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 DEFB131C-201ENST00000528817 165 ntBASIC-0.8□□□□□ -2.54
POLR1AO95602 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.8□□□□□ -2.54
POLR1AO95602 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.8□□□□□ -2.54
POLR1AO95602 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 RNU6-97P-201ENST00000363387 104 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.81□□□□□ -2.54
POLR1AO95602 AC092427.1-201ENST00000439177 601 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 RNU6-856P-201ENST00000516959 98 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.81□□□□□ -2.54
POLR1AO95602 RNU6-94P-201ENST00000607728 107 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.81□□□□□ -2.54
POLR1AO95602 AL357080.1-201ENST00000617394 239 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 MIR544A-201ENST00000384855 91 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 RNU6-57P-201ENST00000411348 103 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 AL354692.1-201ENST00000423044 315 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.81□□□□□ -2.54
POLR1AO95602 AC022447.4-201ENST00000504053 364 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 AC115990.1-201ENST00000526957 301 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 AC090617.9-201ENST00000623751 147 ntBASIC-0.81□□□□□ -2.54
POLR1AO95602 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.82□□□□□ -2.54
POLR1AO95602 HSFY5P-201ENST00000453726 309 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 AC113347.3-201ENST00000509113 148 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 RNA5SP94-201ENST00000516917 108 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 AP002453.2-201ENST00000533503 320 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 RPL17P51-201ENST00000605218 238 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 AC122133.1-201ENST00000613964 233 ntBASIC-0.82□□□□□ -2.54
POLR1AO95602 BX322639.1-202ENST00000423987 2213 ntBASIC-0.83□□□□□ -2.54
POLR1AO95602 RNU6-216P-201ENST00000363282 104 ntBASIC-0.83□□□□□ -2.54
POLR1AO95602 RNU6-673P-201ENST00000365084 104 ntBASIC-0.83□□□□□ -2.54
POLR1AO95602 SNORA2B-201ENST00000384583 137 ntBASIC-0.83□□□□□ -2.54
POLR1AO95602 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.83□□□□□ -2.54
POLR1AO95602 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.83□□□□□ -2.54
POLR1AO95602 RNU7-59P-201ENST00000459101 61 ntBASIC-0.83□□□□□ -2.54
POLR1AO95602 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.83□□□□□ -2.54
POLR1AO95602 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms