Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-325P-201ENST00000411132 105 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 EBAG9P1-201ENST00000418955 543 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.11□□□□□ -2.23
SEMA3DO95025 TOMM22P2-201ENST00000430735 237 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 MRPS10P2-201ENST00000431226 381 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 AL359672.1-201ENST00000442302 409 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.11□□□□□ -2.23
SEMA3DO95025 MTND3P16-201ENST00000452205 344 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 MTCO3P8-201ENST00000453691 755 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 U8.21-201ENST00000459536 136 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 RPS26P55-201ENST00000471178 356 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 Y_RNA.654-201ENST00000497848 106 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 RNU6-1053P-201ENST00000515930 101 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.11□□□□□ -2.23
SEMA3DO95025 AC016256.1-201ENST00000547971 354 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.11□□□□□ -2.23
SEMA3DO95025 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.11□□□□□ -2.23
SEMA3DO95025 MIR3611-201ENST00000584484 83 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 MIR4753-201ENST00000585119 83 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 AP000907.4-201ENST00000604143 237 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 OR5AK4P-201ENST00000635912 903 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 MIR6863-201ENST00000636112 90 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 BX322639.1-202ENST00000423987 2213 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SEMA3DO95025 SNORA33-201ENST00000363664 130 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 SNORA63D-201ENST00000364359 132 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 RNU6-968P-201ENST00000384076 107 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 RNU6-1119P-201ENST00000384349 108 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 RNU6-331P-201ENST00000384724 107 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 MIR521-1-201ENST00000384902 87 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 MIR487A-201ENST00000385009 80 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.1□□□□□ -2.23
SEMA3DO95025 MTATP6P17-201ENST00000431030 672 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.1□□□□□ -2.23
SEMA3DO95025 RNU6-1208P-201ENST00000459588 107 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 RPL30P7-201ENST00000479312 323 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.1□□□□□ -2.23
SEMA3DO95025 AF186996.7-201ENST00000492781 209 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 RNU6-1332P-201ENST00000516666 104 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 RNU6-835P-201ENST00000516974 104 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 RAB11AP2-201ENST00000545905 639 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.1□□□□□ -2.23
SEMA3DO95025 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.1□□□□□ -2.23
SEMA3DO95025 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 AC010620.1-201ENST00000601088 1102 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 AC104458.1-201ENST00000608243 463 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 TCL6_2.1-201ENST00000615162 119 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 MIR338-201ENST00000636369 67 ntBASIC1.1□□□□□ -2.23
SEMA3DO95025 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SEMA3DO95025 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.09□□□□□ -2.23
SEMA3DO95025 MTND5P26-201ENST00000426018 1752 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 RNU6-1322P-201ENST00000364309 107 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 MIR450B-201ENST00000401182 78 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 Y_RNA.595-201ENST00000410403 105 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AC004965.1-201ENST00000413033 213 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.09□□□□□ -2.23
SEMA3DO95025 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AL135790.2-201ENST00000437701 267 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.09□□□□□ -2.23
SEMA3DO95025 AC073910.1-201ENST00000445047 438 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.09□□□□□ -2.23
SEMA3DO95025 Y_RNA.688-201ENST00000516565 95 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.09□□□□□ -2.23
SEMA3DO95025 AL359821.1-201ENST00000605519 182 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 FAM157A-202ENST00000615155 405 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AL158209.2-201ENST00000619266 216 ntBASIC1.09□□□□□ -2.23
SEMA3DO95025 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 SNORA4.2-201ENST00000365313 147 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 RNU6-648P-201ENST00000410190 107 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 RPS26P42-201ENST00000413485 326 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.08□□□□□ -2.24
SEMA3DO95025 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 MTCO3P29-201ENST00000432119 779 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 FTH1P12-201ENST00000432137 551 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 NFU1P2-201ENST00000448700 469 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 OR2AQ1P-201ENST00000451972 200 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 AC083904.1-201ENST00000487828 231 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 RNU6-948P-201ENST00000516374 107 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SEMA3DO95025 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.08□□□□□ -2.24
SEMA3DO95025 AC026470.2-201ENST00000561492 181 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 CPDP1-201ENST00000579660 283 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 FGF7P1-201ENST00000582820 288 ntBASIC1.08□□□□□ -2.24
SEMA3DO95025 SNORD33-201ENST00000362761 85 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 RNU6-1305P-201ENST00000364353 104 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 SNORD116-9-201ENST00000384000 95 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 RNU6-214P-201ENST00000384130 107 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 SNORD116-3-201ENST00000384287 95 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 RNU6-975P-201ENST00000384296 105 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 SNORD116-7-201ENST00000384404 95 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 SNORD116-5-201ENST00000384462 95 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 MIR514A2-201ENST00000385131 88 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 MIR514A3-201ENST00000385132 88 ntBASIC1.07□□□□□ -2.24
SEMA3DO95025 CALM2P3-201ENST00000400429 449 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 204.5 ms