Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC105245.1-201ENST00000581934 244 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 AC007179.3-201ENST00000604976 235 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 AC008873.1-201ENST00000625051 138 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRPF40AO75400 AC093908.1-201ENST00000623125 8092 ntBASIC3.73□□□□□ -1.81
PRPF40AO75400 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.73□□□□□ -1.81
PRPF40AO75400 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF40AO75400 AC000403.1-201ENST00000613696 3585 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 AP003122.5-201ENST00000527668 3766 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 RNU6-1289P-201ENST00000384431 106 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 RNVU1-14-201ENST00000384770 164 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 RNU6-1248P-201ENST00000391096 64 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 SNORA11.1-201ENST00000408133 129 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 Y_RNA.793-201ENST00000411222 111 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 UQCRHP3-201ENST00000451503 251 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 MIR449C-201ENST00000516047 92 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 RNU2-12P-201ENST00000517216 168 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF40AO75400 DEFB117-201ENST00000602356 141 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 AL713866.2-201ENST00000603579 219 ntBASIC3.72□□□□□ -1.81
PRPF40AO75400 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF40AO75400 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.72□□□□□ -1.81
PRPF40AO75400 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PRPF40AO75400 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF40AO75400 Y_RNA.122-201ENST00000363331 96 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 RNU6-662P-201ENST00000384253 104 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 U6atac.2-201ENST00000408644 118 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 RNU6-1328P-201ENST00000410938 106 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 TRIAP1P1-201ENST00000427062 225 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF40AO75400 RNU7-14P-201ENST00000459331 62 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.71□□□□□ -1.82
PRPF40AO75400 AC069294.1-201ENST00000608397 350 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 AC008264.2-201ENST00000610193 3731 ntBASIC3.71□□□□□ -1.82
PRPF40AO75400 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
PRPF40AO75400 RNU6-454P-201ENST00000364292 107 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 Y_RNA.292-201ENST00000364904 97 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 SNORA67.2-201ENST00000384300 149 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 MIR586-201ENST00000385035 97 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 MIR548I3-201ENST00000408378 149 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 U3.40-201ENST00000408706 208 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 MIR548I1-201ENST00000408810 149 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 AC074290.1-201ENST00000448883 135 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 CKS1BP2-201ENST00000497342 240 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 RNU6-191P-201ENST00000516295 94 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF40AO75400 AC023043.3-201ENST00000593113 385 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 AC096577.2-201ENST00000611455 153 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.7□□□□□ -1.82
PRPF40AO75400 AC110774.1-201ENST00000623567 2018 ntBASIC3.7□□□□□ -1.82
PRPF40AO75400 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PRPF40AO75400 MIR411-201ENST00000362239 96 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 RNU1-72P-201ENST00000362976 153 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.82-201ENST00000363000 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.92-201ENST00000363043 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 RNU6-944P-201ENST00000364023 107 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.235-201ENST00000364412 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 SNORA68.1-201ENST00000364537 132 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.306-201ENST00000365015 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.312-201ENST00000365089 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.322-201ENST00000365151 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.329-201ENST00000365209 107 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 RNU4-70P-201ENST00000384579 139 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.650-201ENST00000459002 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.644-201ENST00000459006 113 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF40AO75400 SNORD116-28-201ENST00000516123 91 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.674-201ENST00000516362 113 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.777-201ENST00000516982 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 AC024405.2-202ENST00000532731 184 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.771-201ENST00000598668 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 Y_RNA.789-201ENST00000622480 102 ntBASIC3.69□□□□□ -1.82
PRPF40AO75400 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF40AO75400 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PRPF40AO75400 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF40AO75400 RNA5SP267-201ENST00000364893 126 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 SNORA51.4-201ENST00000364993 124 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 RNU6-234P-201ENST00000365229 104 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 SNORD21-201ENST00000383953 95 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 MIR548B-201ENST00000385247 97 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 MIR300-201ENST00000401138 83 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 AL357075.1-201ENST00000404107 726 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 RNU6-651P-201ENST00000411040 105 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 Y_RNA.626-201ENST00000411288 95 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF40AO75400 AC244505.4-201ENST00000434905 287 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 SSXP5-201ENST00000443473 287 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 Y_RNA.638-201ENST00000459374 113 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 AC008155.2-201ENST00000464337 397 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 COX6CP14-201ENST00000469580 174 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF40AO75400 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
PRPF40AO75400 MIR4753-201ENST00000585119 83 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 AL133393.1-201ENST00000603277 287 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 AC005828.6-201ENST00000606610 232 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 AC004792.1-201ENST00000614523 137 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 MIR5739-201ENST00000619803 80 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 MAPK10-362ENST00000641864 4484 ntBASIC3.68□□□□□ -1.82
PRPF40AO75400 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms