Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-702P-201ENST00000364982 107 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 Y_RNA.452-201ENST00000384202 108 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 MIR628-201ENST00000385229 95 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 RPL21P1-201ENST00000399532 476 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 AL358453.1-201ENST00000422522 250 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 AC079354.2-201ENST00000453523 154 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 AC112492.4-201ENST00000456549 352 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 RN7SKP210-201ENST00000459176 261 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.2□□□□□ -2.06
CACNA1FO60840 RNU6-581P-201ENST00000516214 105 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 SNORD116.3-201ENST00000517176 78 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 RN7SKP40-201ENST00000517211 242 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 AC091144.1-201ENST00000519573 138 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.2□□□□□ -2.06
CACNA1FO60840 U6.99-201ENST00000637524 83 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CACNA1FO60840 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CACNA1FO60840 Y_RNA.26-201ENST00000362539 101 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 RNU6-227P-201ENST00000362865 103 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 RNU6-806P-201ENST00000365147 105 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 SNORA26.9-201ENST00000391322 122 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 Y_RNA.595-201ENST00000410403 105 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 CECR9-201ENST00000453421 199 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1FO60840 AC105758.1-201ENST00000506038 399 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1FO60840 RNU6-475P-201ENST00000516073 104 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 SNORD19.2-201ENST00000516978 73 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 RNU6-388P-201ENST00000517012 105 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 RNU6-389P-201ENST00000517048 105 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 AC109479.2-201ENST00000517842 174 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 MIR4446-201ENST00000578505 67 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 AC090425.1-201ENST00000610007 140 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 AC024581.2-201ENST00000619986 252 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.19□□□□□ -2.06
CACNA1FO60840 AC233981.2-201ENST00000611524 1614 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1FO60840 RNU6-595P-201ENST00000363944 107 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 Z98749.2-208ENST00000381646 500 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CACNA1FO60840 RPS29P13-201ENST00000402041 169 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 RNU2-23P-201ENST00000410545 195 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 AC099548.1-201ENST00000421443 426 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1FO60840 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1FO60840 AC073910.1-201ENST00000445047 438 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 U8.20-201ENST00000459445 131 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1FO60840 AF186996.7-201ENST00000492781 209 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.19□□□□□ -2.06
CACNA1FO60840 AL391261.3-201ENST00000557194 520 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 MIR3935-201ENST00000583472 104 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 AP000942.3-201ENST00000603702 160 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 MIR376A1-201ENST00000616574 68 ntBASIC2.19□□□□□ -2.06
CACNA1FO60840 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1FO60840 Y_RNA.140-201ENST00000363474 103 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 Y_RNA.188-201ENST00000363952 111 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 Y_RNA.396-201ENST00000383949 103 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 AC019129.1-201ENST00000403786 261 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 RPL26P27-201ENST00000414397 437 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 RPL30P5-201ENST00000494923 336 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 RPPH1-2P-201ENST00000516688 293 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 Y_RNA.706-201ENST00000516933 99 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.18□□□□□ -2.06
CACNA1FO60840 AC024614.2-201ENST00000577584 372 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1FO60840 Z82209.1-201ENST00000422141 2135 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 RNU6-379P-201ENST00000363813 104 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 Y_RNA.226-201ENST00000364337 114 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 Y_RNA.358-201ENST00000365491 99 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 Y_RNA.574-201ENST00000384766 95 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 MICF-203ENST00000432679 129 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 AC004383.1-201ENST00000438135 289 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1FO60840 RNU4-77P-201ENST00000516692 156 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 RNU6-703P-201ENST00000516946 107 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 RNU6-1183P-201ENST00000517054 60 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 AP005902.1-201ENST00000521358 186 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 MRPS36P4-201ENST00000534436 298 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.18□□□□□ -2.06
CACNA1FO60840 AL442163.3-201ENST00000554110 156 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 MIR3683-201ENST00000580847 82 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1FO60840 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.18□□□□□ -2.06
CACNA1FO60840 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1FO60840 Y_RNA.123-201ENST00000363338 102 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 Y_RNA.149-201ENST00000363558 117 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 RNU6-1280P-201ENST00000365211 107 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 MIR215-201ENST00000384858 110 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 AL627390.1-201ENST00000396055 340 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 MIR888-201ENST00000401186 77 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1FO60840 AC010655.3-201ENST00000478818 450 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 RPS27P26-201ENST00000494583 239 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 RNU6-397P-201ENST00000516226 104 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 RNU6-612P-201ENST00000516909 102 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 MIR2355-201ENST00000517199 87 ntBASIC2.17□□□□□ -2.06
CACNA1FO60840 RNU6-794P-201ENST00000517261 64 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms