Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-57P-201ENST00000411348 103 ntBASIC0.6□□□□□ -2.31
SGCEO43556 MTND3P17-201ENST00000416968 344 ntBASIC0.6□□□□□ -2.31
SGCEO43556 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.6□□□□□ -2.31
SGCEO43556 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.6□□□□□ -2.31
SGCEO43556 TIMM9P3-201ENST00000428659 274 ntBASIC0.6□□□□□ -2.31
SGCEO43556 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.6□□□□□ -2.31
SGCEO43556 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.6□□□□□ -2.31
SGCEO43556 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.6□□□□□ -2.31
SGCEO43556 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
SGCEO43556 AC022217.4-201ENST00000604389 163 ntBASIC0.6□□□□□ -2.31
SGCEO43556 Z84480.1-201ENST00000605131 311 ntBASIC0.6□□□□□ -2.31
SGCEO43556 AC097065.2-201ENST00000608159 533 ntBASIC0.6□□□□□ -2.31
SGCEO43556 MIR8070-201ENST00000616510 88 ntBASIC0.6□□□□□ -2.31
SGCEO43556 AC073349.3-201ENST00000617616 186 ntBASIC0.6□□□□□ -2.31
SGCEO43556 AC106754.2-201ENST00000623006 233 ntBASIC0.6□□□□□ -2.31
SGCEO43556 RNU6-227P-201ENST00000362865 103 ntBASIC0.59□□□□□ -2.31
SGCEO43556 RNU6-1240P-201ENST00000365155 104 ntBASIC0.59□□□□□ -2.31
SGCEO43556 AF228730.1-201ENST00000397972 663 ntBASIC0.59□□□□□ -2.31
SGCEO43556 MIR320B2-201ENST00000408479 138 ntBASIC0.59□□□□□ -2.31
SGCEO43556 RNU2-29P-201ENST00000410423 189 ntBASIC0.59□□□□□ -2.31
SGCEO43556 RNA5SP494-201ENST00000410653 129 ntBASIC0.59□□□□□ -2.31
SGCEO43556 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.59□□□□□ -2.31
SGCEO43556 AL354692.1-201ENST00000423044 315 ntBASIC0.59□□□□□ -2.31
SGCEO43556 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.59□□□□□ -2.31
SGCEO43556 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.59□□□□□ -2.31
SGCEO43556 AC009961.2-201ENST00000435771 251 ntBASIC0.59□□□□□ -2.31
SGCEO43556 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.59□□□□□ -2.31
SGCEO43556 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.59□□□□□ -2.31
SGCEO43556 RNU7-167P-201ENST00000459160 62 ntBASIC0.59□□□□□ -2.31
SGCEO43556 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.59□□□□□ -2.31
SGCEO43556 RNU6-322P-201ENST00000516010 103 ntBASIC0.59□□□□□ -2.31
SGCEO43556 RNU6-323P-201ENST00000521915 107 ntBASIC0.59□□□□□ -2.31
SGCEO43556 APOOP3-201ENST00000536787 586 ntBASIC0.59□□□□□ -2.31
SGCEO43556 AC004584.2-201ENST00000570407 410 ntBASIC0.59□□□□□ -2.31
SGCEO43556 AC068790.2-201ENST00000602601 557 ntBASIC0.59□□□□□ -2.31
SGCEO43556 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
SGCEO43556 MIR6504-201ENST00000613520 61 ntBASIC0.59□□□□□ -2.31
SGCEO43556 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.59□□□□□ -2.31
SGCEO43556 snoZ196.1-201ENST00000625269 89 ntBASIC0.59□□□□□ -2.31
SGCEO43556 SNORD114-22-201ENST00000365423 72 ntBASIC0.58□□□□□ -2.32
SGCEO43556 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
SGCEO43556 MIR605-201ENST00000385078 83 ntBASIC0.58□□□□□ -2.32
SGCEO43556 MIR660-201ENST00000385235 97 ntBASIC0.58□□□□□ -2.32
SGCEO43556 MIR653-201ENST00000385279 96 ntBASIC0.58□□□□□ -2.32
SGCEO43556 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
SGCEO43556 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.58□□□□□ -2.32
SGCEO43556 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
SGCEO43556 AC245047.3-201ENST00000429428 127 ntBASIC0.58□□□□□ -2.32
SGCEO43556 MTCO3P18-201ENST00000440206 761 ntBASIC0.58□□□□□ -2.32
SGCEO43556 MTCO3P8-201ENST00000453691 755 ntBASIC0.58□□□□□ -2.32
SGCEO43556 RPL39P39-201ENST00000455840 151 ntBASIC0.58□□□□□ -2.32
SGCEO43556 RNU6-1037P-201ENST00000459571 107 ntBASIC0.58□□□□□ -2.32
SGCEO43556 RNU6-612P-201ENST00000516909 102 ntBASIC0.58□□□□□ -2.32
SGCEO43556 AC025647.1-201ENST00000517879 253 ntBASIC0.58□□□□□ -2.32
SGCEO43556 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.58□□□□□ -2.32
SGCEO43556 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.58□□□□□ -2.32
SGCEO43556 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
SGCEO43556 BNIP3P39-201ENST00000601077 554 ntBASIC0.58□□□□□ -2.32
SGCEO43556 AL357312.1-201ENST00000603879 298 ntBASIC0.58□□□□□ -2.32
SGCEO43556 U2.17-201ENST00000611454 95 ntBASIC0.58□□□□□ -2.32
SGCEO43556 AC022306.3-201ENST00000619930 550 ntBASIC0.58□□□□□ -2.32
SGCEO43556 AL603839.4-201ENST00000624658 1005 ntBASIC0.58□□□□□ -2.32
SGCEO43556 AL078596.1-201ENST00000624856 447 ntBASIC0.58□□□□□ -2.32
SGCEO43556 RNA5SP361-201ENST00000362686 118 ntBASIC0.57□□□□□ -2.32
SGCEO43556 RNU5B-2P-201ENST00000363036 113 ntBASIC0.57□□□□□ -2.32
SGCEO43556 Y_RNA.164-201ENST00000363709 102 ntBASIC0.57□□□□□ -2.32
SGCEO43556 Y_RNA.191-201ENST00000363972 113 ntBASIC0.57□□□□□ -2.32
SGCEO43556 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
SGCEO43556 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
SGCEO43556 RNU6-195P-201ENST00000411352 109 ntBASIC0.57□□□□□ -2.32
SGCEO43556 RPS26P5-201ENST00000418544 335 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.57□□□□□ -2.32
SGCEO43556 RPL31P35-201ENST00000431058 377 ntBASIC0.57□□□□□ -2.32
SGCEO43556 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SGCEO43556 AC007215.1-201ENST00000464893 276 ntBASIC0.57□□□□□ -2.32
SGCEO43556 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.57□□□□□ -2.32
SGCEO43556 HMGB1P29-201ENST00000505659 499 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC105417.1-201ENST00000514691 285 ntBASIC0.57□□□□□ -2.32
SGCEO43556 RNU6-947P-201ENST00000516264 106 ntBASIC0.57□□□□□ -2.32
SGCEO43556 DEFB108E-201ENST00000524692 240 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC011604.1-201ENST00000545978 196 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC090049.2-201ENST00000550377 109 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC025449.1-201ENST00000603896 529 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC104465.1-201ENST00000611365 139 ntBASIC0.57□□□□□ -2.32
SGCEO43556 AC004223.4-201ENST00000612426 332 ntBASIC0.57□□□□□ -2.32
SGCEO43556 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
SGCEO43556 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.57□□□□□ -2.32
SGCEO43556 U6.108-201ENST00000637764 58 ntBASIC0.57□□□□□ -2.32
SGCEO43556 RNU6-199P-201ENST00000362954 107 ntBASIC0.56□□□□□ -2.32
SGCEO43556 RNU6-1214P-201ENST00000363650 109 ntBASIC0.56□□□□□ -2.32
SGCEO43556 RNU4-28P-201ENST00000364739 141 ntBASIC0.56□□□□□ -2.32
SGCEO43556 SNORA25.9-201ENST00000365087 128 ntBASIC0.56□□□□□ -2.32
SGCEO43556 Y_RNA.363-201ENST00000365529 113 ntBASIC0.56□□□□□ -2.32
SGCEO43556 RNU6-17P-201ENST00000384245 107 ntBASIC0.56□□□□□ -2.32
SGCEO43556 RNU6-18P-201ENST00000384527 107 ntBASIC0.56□□□□□ -2.32
SGCEO43556 RNU6-925P-201ENST00000384629 104 ntBASIC0.56□□□□□ -2.32
SGCEO43556 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.56□□□□□ -2.32
SGCEO43556 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms