Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 Y_RNA.39-201ENST00000362620 98 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 SNORA63-201ENST00000363450 132 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 RNU4-42P-201ENST00000364738 142 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 RNU6-438P-201ENST00000365561 103 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 SNORA18.2-201ENST00000383865 132 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 Y_RNA.526-201ENST00000384572 110 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 MIR10B-201ENST00000385011 110 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 AC007395.1-201ENST00000451333 677 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 NDUFB4P10-201ENST00000452541 359 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 AC107032.1-201ENST00000485945 480 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 RNU2-34P-201ENST00000516534 121 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 RNA5SP490-201ENST00000517141 136 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 AP003072.1-201ENST00000531740 145 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 MIR3945-201ENST00000581853 98 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 AC005296.1-201ENST00000616145 209 ntBASIC2.82□□□□□ -1.96
PRPF3O43395 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF3O43395 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.82□□□□□ -1.96
PRPF3O43395 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF3O43395 AL136360.1-201ENST00000503377 1900 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 MIR6073-201ENST00000352083 89 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 RNU6-873P-201ENST00000363833 107 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 Y_RNA.202-201ENST00000364083 110 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 Y_RNA.216-201ENST00000364205 93 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 AC117470.1-201ENST00000381974 330 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 SNORA22B-201ENST00000383876 138 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 RNU6-793P-201ENST00000384233 104 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 MIR549A-201ENST00000385268 96 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 Y_RNA.592-201ENST00000410274 109 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.81□□□□□ -1.96
PRPF3O43395 EIF1P2-201ENST00000428233 350 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 AC096644.2-201ENST00000429278 159 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.81□□□□□ -1.96
PRPF3O43395 RNU7-14P-201ENST00000459331 62 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 GNAI2P1-201ENST00000541815 315 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.81□□□□□ -1.96
PRPF3O43395 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.81□□□□□ -1.96
PRPF3O43395 VN1R91P-201ENST00000594377 169 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 AC010999.1-201ENST00000611856 324 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 MIR6715A-201ENST00000615929 79 ntBASIC2.81□□□□□ -1.96
PRPF3O43395 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PRPF3O43395 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PRPF3O43395 Y_RNA.148-201ENST00000363557 117 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 Y_RNA.179-201ENST00000363844 90 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 RNU1-148P-201ENST00000384472 162 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 Y_RNA.557-201ENST00000384680 107 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 MIR586-201ENST00000385035 97 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 MIR628-201ENST00000385229 95 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 AC007064.1-201ENST00000412238 351 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.8□□□□□ -1.96
PRPF3O43395 OOSP1P1-201ENST00000423265 274 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 AL445305.1-201ENST00000432577 575 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.8□□□□□ -1.96
PRPF3O43395 AC093259.1-201ENST00000509755 300 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 RNU4-77P-201ENST00000516692 156 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 RNU6-965P-201ENST00000516721 96 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 RNU6-1098P-201ENST00000516772 96 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 ANP32BP3-201ENST00000559213 706 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 UBL5P4-201ENST00000562584 236 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.8□□□□□ -1.96
PRPF3O43395 MIR4658-201ENST00000584344 65 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 AC008873.1-201ENST00000625051 138 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 MIR1248-201ENST00000629190 106 ntBASIC2.8□□□□□ -1.96
PRPF3O43395 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.8□□□□□ -1.96
PRPF3O43395 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PRPF3O43395 RNU1-91P-201ENST00000364746 163 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 Y_RNA.332-201ENST00000365271 113 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 RNU1-52P-201ENST00000384190 164 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 RNU6-281P-201ENST00000384212 103 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 SNORA67.4-201ENST00000384688 142 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 RNA5SP213-201ENST00000391031 106 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.79□□□□□ -1.96
PRPF3O43395 WARS2P1-201ENST00000429678 537 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 CHEK2P4-201ENST00000450340 246 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 MTCO3P8-201ENST00000453691 755 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 AL139109.1-201ENST00000455491 297 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 AC016925.1-201ENST00000458303 298 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 U8.22-201ENST00000459141 133 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 SNORA25.10-201ENST00000515926 124 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 Y_RNA.683-201ENST00000516508 93 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 SNORA40.14-201ENST00000516543 86 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 MIR4753-201ENST00000585119 83 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 AC078899.2-201ENST00000595282 212 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 AL353621.2-201ENST00000605340 133 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 U2.1-201ENST00000618978 145 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.79□□□□□ -1.96
PRPF3O43395 AC138305.3-201ENST00000624988 240 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 CTSLP2-204ENST00000629029 392 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 AL606534.2-204ENST00000635008 178 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 MIR4272-201ENST00000635924 64 ntBASIC2.79□□□□□ -1.96
PRPF3O43395 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
PRPF3O43395 MIR21-201ENST00000362134 72 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 Y_RNA.326-201ENST00000365176 113 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 MIR524-201ENST00000385242 87 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 AC123900.1-201ENST00000420390 96 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 HMGN2P18-201ENST00000450680 270 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 PRELID3BP1-201ENST00000457142 540 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 AC026436.1-201ENST00000510537 270 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.78□□□□□ -1.96
PRPF3O43395 AC074133.1-201ENST00000515696 183 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms