Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC040926.1-201ENST00000530195 238 ntBASIC-1.64□□□□□ -2.67
NDUFA1O15239 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.64□□□□□ -2.67
NDUFA1O15239 AC121334.2-201ENST00000605387 271 ntBASIC-1.64□□□□□ -2.67
NDUFA1O15239 AC090186.1-201ENST00000605991 572 ntBASIC-1.64□□□□□ -2.67
NDUFA1O15239 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.64□□□□□ -2.67
NDUFA1O15239 SCARNA4-201ENST00000629045 128 ntBASIC-1.64□□□□□ -2.67
NDUFA1O15239 RNA5SP205-201ENST00000364653 136 ntBASIC-1.65□□□□□ -2.67
NDUFA1O15239 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.65□□□□□ -2.67
NDUFA1O15239 AL356583.2-201ENST00000426536 280 ntBASIC-1.65□□□□□ -2.67
NDUFA1O15239 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.65□□□□□ -2.67
NDUFA1O15239 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.65□□□□□ -2.67
NDUFA1O15239 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.65□□□□□ -2.67
NDUFA1O15239 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 U8.5-201ENST00000364528 136 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 RNU6-843P-201ENST00000384454 104 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 SNORA2B-201ENST00000384583 137 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 SNORA12.2-201ENST00000391040 156 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 RNA5SP266-201ENST00000410273 108 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 FCF1P9-201ENST00000412546 282 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.66□□□□□ -2.68
NDUFA1O15239 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.66□□□□□ -2.68
NDUFA1O15239 FABP5P15-201ENST00000453566 214 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.66□□□□□ -2.68
NDUFA1O15239 AL391840.1-201ENST00000571144 367 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 MIR4782-201ENST00000577987 79 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 AC122133.1-201ENST00000613964 233 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 AC010133.1-201ENST00000615809 842 ntBASIC-1.66□□□□□ -2.68
NDUFA1O15239 RNU6-212P-201ENST00000362642 104 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 RNU6-487P-201ENST00000365430 104 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 BTF3P15-201ENST00000455606 336 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 RN7SKP164-201ENST00000516138 266 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 MIR4306-201ENST00000583390 91 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 BNIP3P30-201ENST00000601184 574 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 AC006441.5-201ENST00000612680 209 ntBASIC-1.67□□□□□ -2.68
NDUFA1O15239 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.67□□□□□ -2.68
NDUFA1O15239 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.67□□□□□ -2.68
NDUFA1O15239 SNORD114-25-201ENST00000363742 72 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 SNORD32B-201ENST00000364460 84 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 RNU6-116P-201ENST00000384042 109 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 AC006366.1-201ENST00000422002 759 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.68□□□□□ -2.68
NDUFA1O15239 LRRC6P1-201ENST00000532188 885 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.68□□□□□ -2.68
NDUFA1O15239 AC133485.4-201ENST00000561835 220 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 AC078795.3-201ENST00000602913 472 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 AL161798.1-201ENST00000604630 131 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 AP000484.1-201ENST00000620067 1252 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 FRG1KP-201ENST00000623592 341 ntBASIC-1.68□□□□□ -2.68
NDUFA1O15239 SNORA33-201ENST00000363664 130 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 AL133264.1-201ENST00000407157 562 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 FO393419.3-201ENST00000428741 282 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.69□□□□□ -2.68
NDUFA1O15239 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 RNU6-927P-201ENST00000516199 100 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 SNORA18.7-201ENST00000516910 131 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 AC004217.3-201ENST00000551552 878 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 AC006380.1-201ENST00000603598 186 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.69□□□□□ -2.68
NDUFA1O15239 AL450472.1-202ENST00000637286 180 ntBASIC-1.69□□□□□ -2.68
NDUFA1O15239 RNU6-428P-201ENST00000362942 107 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 SNORA32.2-201ENST00000384049 122 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
NDUFA1O15239 AC092809.3-201ENST00000415453 231 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 AL606517.2-201ENST00000442855 241 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 AC068135.1-201ENST00000446164 246 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 MTND1P33-201ENST00000446251 917 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 MIR4804-201ENST00000581683 73 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 MIR6828-201ENST00000636181 60 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 MTND4P9-201ENST00000507819 1346 ntBASIC-1.7□□□□□ -2.68
NDUFA1O15239 SNORA72.1-201ENST00000363485 129 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 RNU6-622P-201ENST00000384272 103 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 MIR501-201ENST00000390204 84 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 RPS20P2-201ENST00000402520 389 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 AL133396.1-201ENST00000432048 687 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 AC010531.2-201ENST00000465012 153 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 AC021146.6-201ENST00000514659 117 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 RNU6-567P-201ENST00000516746 107 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 RNA5SP66-201ENST00000517178 101 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.71□□□□□ -2.68
NDUFA1O15239 AP002802.2-201ENST00000605877 235 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 MIR8054-201ENST00000620877 86 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 AL356094.1-201ENST00000624663 1212 ntBASIC-1.71□□□□□ -2.68
NDUFA1O15239 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.72□□□□□ -2.68
NDUFA1O15239 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.72□□□□□ -2.68
NDUFA1O15239 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.72□□□□□ -2.68
NDUFA1O15239 AC013262.1-201ENST00000426710 252 ntBASIC-1.72□□□□□ -2.68
NDUFA1O15239 HSFY5P-201ENST00000453726 309 ntBASIC-1.72□□□□□ -2.68
NDUFA1O15239 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.72□□□□□ -2.68
NDUFA1O15239 RPS23P5-201ENST00000495419 428 ntBASIC-1.72□□□□□ -2.68
NDUFA1O15239 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.72□□□□□ -2.68
NDUFA1O15239 RNU6-63P-201ENST00000516690 95 ntBASIC-1.72□□□□□ -2.68
NDUFA1O15239 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 SNORD115-2-201ENST00000362842 82 ntBASIC-1.73□□□□□ -2.69
NDUFA1O15239 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms