Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MTND3P7-201ENST00000474435 343 ntBASIC1.02□□□□□ -2.25
LSM1O15116 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM1O15116 RNA5SP458-201ENST00000516188 119 ntBASIC1.02□□□□□ -2.25
LSM1O15116 SNORA31.10-201ENST00000516482 106 ntBASIC1.02□□□□□ -2.25
LSM1O15116 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.02□□□□□ -2.25
LSM1O15116 MRPS36P4-201ENST00000534436 298 ntBASIC1.02□□□□□ -2.25
LSM1O15116 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.02□□□□□ -2.25
LSM1O15116 MTATP6P24-201ENST00000576835 677 ntBASIC1.02□□□□□ -2.25
LSM1O15116 AP000907.4-201ENST00000604143 237 ntBASIC1.02□□□□□ -2.25
LSM1O15116 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
LSM1O15116 AL359757.2-201ENST00000624309 274 ntBASIC1.02□□□□□ -2.25
LSM1O15116 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LSM1O15116 MTND4P5-201ENST00000435821 1374 ntBASIC1.01□□□□□ -2.25
LSM1O15116 RNU6-968P-201ENST00000384076 107 ntBASIC1.01□□□□□ -2.25
LSM1O15116 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
LSM1O15116 SNORA12.1-201ENST00000390873 148 ntBASIC1.01□□□□□ -2.25
LSM1O15116 RNA5SP109-201ENST00000391010 116 ntBASIC1.01□□□□□ -2.25
LSM1O15116 RNA5SP494-201ENST00000410653 129 ntBASIC1.01□□□□□ -2.25
LSM1O15116 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.01□□□□□ -2.25
LSM1O15116 AC092473.1-201ENST00000441098 221 ntBASIC1.01□□□□□ -2.25
LSM1O15116 RNU7-34P-201ENST00000459394 64 ntBASIC1.01□□□□□ -2.25
LSM1O15116 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
LSM1O15116 MTCO3P38-201ENST00000468910 766 ntBASIC1.01□□□□□ -2.25
LSM1O15116 AL163540.1-201ENST00000485382 386 ntBASIC1.01□□□□□ -2.25
LSM1O15116 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
LSM1O15116 RNU6-189P-201ENST00000516120 101 ntBASIC1.01□□□□□ -2.25
LSM1O15116 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.01□□□□□ -2.25
LSM1O15116 AC087854.1-201ENST00000519706 414 ntBASIC1.01□□□□□ -2.25
LSM1O15116 MIR4528-201ENST00000577763 90 ntBASIC1.01□□□□□ -2.25
LSM1O15116 MIR4769-201ENST00000584126 77 ntBASIC1.01□□□□□ -2.25
LSM1O15116 AC040904.1-201ENST00000590850 223 ntBASIC1.01□□□□□ -2.25
LSM1O15116 AL929325.1-201ENST00000603096 117 ntBASIC1.01□□□□□ -2.25
LSM1O15116 Z99497.2-201ENST00000603634 310 ntBASIC1.01□□□□□ -2.25
LSM1O15116 AL022345.2-201ENST00000606307 135 ntBASIC1.01□□□□□ -2.25
LSM1O15116 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
LSM1O15116 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LSM1O15116 RNU6-1317P-201ENST00000364582 104 ntBASIC1□□□□□ -2.25
LSM1O15116 RNA5SP259-201ENST00000365541 109 ntBASIC1□□□□□ -2.25
LSM1O15116 AL049545.1-201ENST00000401856 572 ntBASIC1□□□□□ -2.25
LSM1O15116 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1□□□□□ -2.25
LSM1O15116 AL353193.1-201ENST00000421444 268 ntBASIC1□□□□□ -2.25
LSM1O15116 RNU6-237P-201ENST00000515985 71 ntBASIC1□□□□□ -2.25
LSM1O15116 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1□□□□□ -2.25
LSM1O15116 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1□□□□□ -2.25
LSM1O15116 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1□□□□□ -2.25
LSM1O15116 AL118558.2-201ENST00000556294 238 ntBASIC1□□□□□ -2.25
LSM1O15116 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1□□□□□ -2.25
LSM1O15116 CPDP1-201ENST00000579660 283 ntBASIC1□□□□□ -2.25
LSM1O15116 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1□□□□□ -2.25
LSM1O15116 MIR4760-201ENST00000585040 80 ntBASIC1□□□□□ -2.25
LSM1O15116 AC022217.4-201ENST00000604389 163 ntBASIC1□□□□□ -2.25
LSM1O15116 RMST_3.1-201ENST00000611651 109 ntBASIC1□□□□□ -2.25
LSM1O15116 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1□□□□□ -2.25
LSM1O15116 AC006001.4-201ENST00000622243 395 ntBASIC1□□□□□ -2.25
LSM1O15116 AC091931.1-201ENST00000623488 728 ntBASIC1□□□□□ -2.25
LSM1O15116 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
LSM1O15116 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
LSM1O15116 RNU6-1031P-201ENST00000384773 107 ntBASIC0.99□□□□□ -2.25
LSM1O15116 RNA5SP504-201ENST00000410676 117 ntBASIC0.99□□□□□ -2.25
LSM1O15116 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.99□□□□□ -2.25
LSM1O15116 U8.21-201ENST00000459536 136 ntBASIC0.99□□□□□ -2.25
LSM1O15116 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.99□□□□□ -2.25
LSM1O15116 AC025647.1-201ENST00000517879 253 ntBASIC0.99□□□□□ -2.25
LSM1O15116 CYCSP23-201ENST00000519781 313 ntBASIC0.99□□□□□ -2.25
LSM1O15116 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.99□□□□□ -2.25
LSM1O15116 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.99□□□□□ -2.25
LSM1O15116 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.99□□□□□ -2.25
LSM1O15116 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.99□□□□□ -2.25
LSM1O15116 BX284668.6-201ENST00000606899 438 ntBASIC0.99□□□□□ -2.25
LSM1O15116 SCARNA4-201ENST00000629045 128 ntBASIC0.99□□□□□ -2.25
LSM1O15116 AC068647.2-201ENST00000637380 353 ntBASIC0.99□□□□□ -2.25
LSM1O15116 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.98□□□□□ -2.25
LSM1O15116 RNU6-1305P-201ENST00000364353 104 ntBASIC0.98□□□□□ -2.25
LSM1O15116 RNU6-784P-201ENST00000384330 106 ntBASIC0.98□□□□□ -2.25
LSM1O15116 RNU6-950P-201ENST00000384651 107 ntBASIC0.98□□□□□ -2.25
LSM1O15116 AL606923.1-201ENST00000406616 190 ntBASIC0.98□□□□□ -2.25
LSM1O15116 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.98□□□□□ -2.25
LSM1O15116 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.98□□□□□ -2.25
LSM1O15116 TIMM9P3-201ENST00000428659 274 ntBASIC0.98□□□□□ -2.25
LSM1O15116 TPTE2P5-203ENST00000458118 728 ntBASIC0.98□□□□□ -2.25
LSM1O15116 RNU7-57P-201ENST00000459540 60 ntBASIC0.98□□□□□ -2.25
LSM1O15116 RNU6-221P-201ENST00000459541 99 ntBASIC0.98□□□□□ -2.25
LSM1O15116 SNORA40.12-201ENST00000516329 111 ntBASIC0.98□□□□□ -2.25
LSM1O15116 RNU6-344P-201ENST00000516635 111 ntBASIC0.98□□□□□ -2.25
LSM1O15116 RNU7-128P-201ENST00000517247 62 ntBASIC0.98□□□□□ -2.25
LSM1O15116 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.98□□□□□ -2.25
LSM1O15116 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.98□□□□□ -2.25
LSM1O15116 MIR5692C1-201ENST00000585309 91 ntBASIC0.98□□□□□ -2.25
LSM1O15116 AC004223.2-201ENST00000590309 544 ntBASIC0.98□□□□□ -2.25
LSM1O15116 SNRPGP20-201ENST00000604477 205 ntBASIC0.98□□□□□ -2.25
LSM1O15116 snoU13.31-201ENST00000607291 104 ntBASIC0.98□□□□□ -2.25
LSM1O15116 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.98□□□□□ -2.25
LSM1O15116 AL354950.2-201ENST00000617939 290 ntBASIC0.98□□□□□ -2.25
LSM1O15116 AC023510.2-201ENST00000622162 746 ntBASIC0.98□□□□□ -2.25
LSM1O15116 snoZ196.1-201ENST00000625269 89 ntBASIC0.98□□□□□ -2.25
LSM1O15116 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.98□□□□□ -2.25
LSM1O15116 FER-210ENST00000628534 558 ntTSL 5 BASIC0.98□□□□□ -2.25
LSM1O15116 OR5AK4P-201ENST00000635912 903 ntBASIC0.98□□□□□ -2.25
LSM1O15116 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LSM1O15116 Y_RNA.123-201ENST00000363338 102 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms