Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.9□□□□□ -2.11
RTCAO00442 RNU6-991P-201ENST00000516168 107 ntBASIC1.9□□□□□ -2.11
RTCAO00442 Y_RNA.670-201ENST00000516255 105 ntBASIC1.9□□□□□ -2.11
RTCAO00442 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
RTCAO00442 RNA5SP54-201ENST00000516951 92 ntBASIC1.9□□□□□ -2.11
RTCAO00442 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.9□□□□□ -2.11
RTCAO00442 AP000889.1-201ENST00000530968 660 ntBASIC1.9□□□□□ -2.11
RTCAO00442 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
RTCAO00442 MIR4273-201ENST00000582824 84 ntBASIC1.9□□□□□ -2.11
RTCAO00442 AC005786.1-201ENST00000588553 154 ntBASIC1.9□□□□□ -2.11
RTCAO00442 AL158827.2-201ENST00000602494 330 ntBASIC1.9□□□□□ -2.11
RTCAO00442 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.9□□□□□ -2.11
RTCAO00442 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.9□□□□□ -2.11
RTCAO00442 AL691447.3-201ENST00000635020 330 ntBASIC1.9□□□□□ -2.11
RTCAO00442 AP000553.5-201ENST00000641933 54 ntBASIC1.9□□□□□ -2.11
RTCAO00442 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
RTCAO00442 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RTCAO00442 RNU6-661P-201ENST00000362409 107 ntBASIC1.89□□□□□ -2.11
RTCAO00442 Y_RNA.263-201ENST00000364659 114 ntBASIC1.89□□□□□ -2.11
RTCAO00442 Y_RNA.332-201ENST00000365271 113 ntBASIC1.89□□□□□ -2.11
RTCAO00442 RNU6-245P-201ENST00000384020 107 ntBASIC1.89□□□□□ -2.11
RTCAO00442 RNU6-17P-201ENST00000384245 107 ntBASIC1.89□□□□□ -2.11
RTCAO00442 RNU6-18P-201ENST00000384527 107 ntBASIC1.89□□□□□ -2.11
RTCAO00442 RNU6-1093P-201ENST00000391194 107 ntBASIC1.89□□□□□ -2.11
RTCAO00442 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RTCAO00442 snoU13.6-201ENST00000458785 104 ntBASIC1.89□□□□□ -2.11
RTCAO00442 snoU13.30-201ENST00000458951 104 ntBASIC1.89□□□□□ -2.11
RTCAO00442 AC091951.2-201ENST00000500762 203 ntBASIC1.89□□□□□ -2.11
RTCAO00442 RNU6-875P-201ENST00000516488 106 ntBASIC1.89□□□□□ -2.11
RTCAO00442 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
RTCAO00442 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.89□□□□□ -2.11
RTCAO00442 MIR4648-201ENST00000580107 72 ntBASIC1.89□□□□□ -2.11
RTCAO00442 AC005899.2-201ENST00000584353 90 ntBASIC1.89□□□□□ -2.11
RTCAO00442 AC113139.1-201ENST00000605049 239 ntBASIC1.89□□□□□ -2.11
RTCAO00442 LARP7P1-201ENST00000605576 316 ntBASIC1.89□□□□□ -2.11
RTCAO00442 TCL6_2.1-201ENST00000615162 119 ntBASIC1.89□□□□□ -2.11
RTCAO00442 AL359697.1-201ENST00000624879 587 ntBASIC1.89□□□□□ -2.11
RTCAO00442 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.89□□□□□ -2.11
RTCAO00442 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.89□□□□□ -2.11
RTCAO00442 MIR153-2-201ENST00000385225 87 ntBASIC1.88□□□□□ -2.11
RTCAO00442 RNU2-41P-201ENST00000410991 178 ntBASIC1.88□□□□□ -2.11
RTCAO00442 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.88□□□□□ -2.11
RTCAO00442 USMG5P1-201ENST00000425964 177 ntBASIC1.88□□□□□ -2.11
RTCAO00442 RPS29P21-201ENST00000496272 170 ntBASIC1.88□□□□□ -2.11
RTCAO00442 RNU6-277P-201ENST00000516272 106 ntBASIC1.88□□□□□ -2.11
RTCAO00442 Y_RNA.702-201ENST00000516843 96 ntBASIC1.88□□□□□ -2.11
RTCAO00442 RNA5SP490-201ENST00000517141 136 ntBASIC1.88□□□□□ -2.11
RTCAO00442 HSPE1P18-201ENST00000517602 280 ntBASIC1.88□□□□□ -2.11
RTCAO00442 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
RTCAO00442 AC016727.1-205ENST00000605437 569 ntBASIC1.88□□□□□ -2.11
RTCAO00442 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.88□□□□□ -2.11
RTCAO00442 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.88□□□□□ -2.11
RTCAO00442 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RTCAO00442 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
RTCAO00442 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
RTCAO00442 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
RTCAO00442 Y_RNA.70-201ENST00000362886 110 ntBASIC1.87□□□□□ -2.11
RTCAO00442 RNA5SP493-201ENST00000364115 91 ntBASIC1.87□□□□□ -2.11
RTCAO00442 RNA5SP138-201ENST00000365098 114 ntBASIC1.87□□□□□ -2.11
RTCAO00442 RNA5SP37-201ENST00000365420 130 ntBASIC1.87□□□□□ -2.11
RTCAO00442 Y_RNA.533-201ENST00000384596 114 ntBASIC1.87□□□□□ -2.11
RTCAO00442 RNU6-1009P-201ENST00000390996 107 ntBASIC1.87□□□□□ -2.11
RTCAO00442 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
RTCAO00442 RNU2-20P-201ENST00000410425 191 ntBASIC1.87□□□□□ -2.11
RTCAO00442 RNU4-14P-201ENST00000410858 122 ntBASIC1.87□□□□□ -2.11
RTCAO00442 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RTCAO00442 HSPE1P21-201ENST00000438283 308 ntBASIC1.87□□□□□ -2.11
RTCAO00442 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.87□□□□□ -2.11
RTCAO00442 HMGN2P18-201ENST00000450680 270 ntBASIC1.87□□□□□ -2.11
RTCAO00442 AC016925.1-201ENST00000458303 298 ntBASIC1.87□□□□□ -2.11
RTCAO00442 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.87□□□□□ -2.11
RTCAO00442 FO393415.2-201ENST00000480085 343 ntBASIC1.87□□□□□ -2.11
RTCAO00442 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.87□□□□□ -2.11
RTCAO00442 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.87□□□□□ -2.11
RTCAO00442 RNU6-307P-201ENST00000516743 106 ntBASIC1.87□□□□□ -2.11
RTCAO00442 DEFB131C-201ENST00000528817 165 ntBASIC1.87□□□□□ -2.11
RTCAO00442 AL590705.4-201ENST00000532209 134 ntBASIC1.87□□□□□ -2.11
RTCAO00442 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.87□□□□□ -2.11
RTCAO00442 AC090517.1-201ENST00000569307 266 ntBASIC1.87□□□□□ -2.11
RTCAO00442 MIR3169-201ENST00000578032 83 ntBASIC1.87□□□□□ -2.11
RTCAO00442 7SK.7-201ENST00000603504 247 ntBASIC1.87□□□□□ -2.11
RTCAO00442 AC016727.2-201ENST00000603988 621 ntBASIC1.87□□□□□ -2.11
RTCAO00442 AC005014.2-201ENST00000607795 599 ntBASIC1.87□□□□□ -2.11
RTCAO00442 AC009229.3-201ENST00000608056 282 ntBASIC1.87□□□□□ -2.11
RTCAO00442 AL132765.2-201ENST00000610812 351 ntBASIC1.87□□□□□ -2.11
RTCAO00442 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.87□□□□□ -2.11
RTCAO00442 AC005562.2-201ENST00000618264 111 ntBASIC1.87□□□□□ -2.11
RTCAO00442 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RTCAO00442 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RTCAO00442 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
RTCAO00442 RNU6-1188P-201ENST00000363795 107 ntBASIC1.86□□□□□ -2.11
RTCAO00442 SNORD31B-201ENST00000364977 69 ntBASIC1.86□□□□□ -2.11
RTCAO00442 SNORA70B-201ENST00000384210 135 ntBASIC1.86□□□□□ -2.11
RTCAO00442 SNORA75.4-201ENST00000391278 119 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RNA5SP100-201ENST00000410903 110 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RNA5SP59-201ENST00000410922 110 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RN7SKP192-201ENST00000411291 327 ntBASIC1.86□□□□□ -2.11
RTCAO00442 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.86□□□□□ -2.11
RTCAO00442 Z82188.1-201ENST00000436709 154 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms