Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
H3BM21 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
H3BM21 AL606490.9-201ENST00000603331 271 ntBASIC4.08□□□□□ -1.76
H3BM21 MIR432-201ENST00000606207 94 ntBASIC4.08□□□□□ -1.76
H3BM21 Pinc.1-201ENST00000616452 154 ntBASIC4.08□□□□□ -1.76
H3BM21 AL159152.1-201ENST00000635019 2587 ntBASIC4.08□□□□□ -1.76
H3BM21 AL162726.3-218ENST00000636401 95 ntBASIC4.08□□□□□ -1.76
H3BM21 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
H3BM21 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
H3BM21 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
H3BM21 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.07□□□□□ -1.76
H3BM21 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
H3BM21 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
H3BM21 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
H3BM21 AL356292.1-201ENST00000283110 373 ntBASIC4.07□□□□□ -1.76
H3BM21 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
H3BM21 RNU6-644P-201ENST00000391155 98 ntBASIC4.07□□□□□ -1.76
H3BM21 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
H3BM21 AL355796.1-201ENST00000406706 323 ntBASIC4.07□□□□□ -1.76
H3BM21 RNA5SP104-201ENST00000410989 118 ntBASIC4.07□□□□□ -1.76
H3BM21 HMGN2P30-201ENST00000423237 256 ntBASIC4.07□□□□□ -1.76
H3BM21 SNRPGP5-201ENST00000456003 220 ntBASIC4.07□□□□□ -1.76
H3BM21 AC010285.1-201ENST00000470580 392 ntBASIC4.07□□□□□ -1.76
H3BM21 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.07□□□□□ -1.76
H3BM21 RPL29P14-201ENST00000495837 428 ntBASIC4.07□□□□□ -1.76
H3BM21 AC025445.1-201ENST00000502728 300 ntBASIC4.07□□□□□ -1.76
H3BM21 RNU6-126P-201ENST00000516685 103 ntBASIC4.07□□□□□ -1.76
H3BM21 IFITM8P-201ENST00000522529 394 ntBASIC4.07□□□□□ -1.76
H3BM21 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.07□□□□□ -1.76
H3BM21 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.07□□□□□ -1.76
H3BM21 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.07□□□□□ -1.76
H3BM21 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.07□□□□□ -1.76
H3BM21 AC006130.2-201ENST00000586202 326 ntBASIC4.07□□□□□ -1.76
H3BM21 AL034555.1-201ENST00000604816 211 ntBASIC4.07□□□□□ -1.76
H3BM21 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.07□□□□□ -1.76
H3BM21 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
H3BM21 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
H3BM21 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
H3BM21 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
H3BM21 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
H3BM21 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
H3BM21 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
H3BM21 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H3BM21 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
H3BM21 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.06□□□□□ -1.76
H3BM21 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.06□□□□□ -1.76
H3BM21 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H3BM21 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H3BM21 SNORD74.4-201ENST00000364129 80 ntBASIC4.06□□□□□ -1.76
H3BM21 RNU6-1292P-201ENST00000383856 107 ntBASIC4.06□□□□□ -1.76
H3BM21 RNU6-418P-201ENST00000384035 107 ntBASIC4.06□□□□□ -1.76
H3BM21 Y_RNA.486-201ENST00000384398 107 ntBASIC4.06□□□□□ -1.76
H3BM21 SNORD116-22-201ENST00000384430 92 ntBASIC4.06□□□□□ -1.76
H3BM21 MIR548D2-201ENST00000384955 97 ntBASIC4.06□□□□□ -1.76
H3BM21 RNA5SP201-201ENST00000410316 124 ntBASIC4.06□□□□□ -1.76
H3BM21 Y_RNA.601-201ENST00000410500 113 ntBASIC4.06□□□□□ -1.76
H3BM21 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
H3BM21 TOMM22P1-201ENST00000418578 312 ntBASIC4.06□□□□□ -1.76
H3BM21 RPS29P7-201ENST00000439662 171 ntBASIC4.06□□□□□ -1.76
H3BM21 HMGN2P21-201ENST00000447764 270 ntBASIC4.06□□□□□ -1.76
H3BM21 RPS26P55-201ENST00000471178 356 ntBASIC4.06□□□□□ -1.76
H3BM21 Vault.1-201ENST00000516474 102 ntBASIC4.06□□□□□ -1.76
H3BM21 RNU6-267P-201ENST00000516714 103 ntBASIC4.06□□□□□ -1.76
H3BM21 RNU7-149P-201ENST00000516739 59 ntBASIC4.06□□□□□ -1.76
H3BM21 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
H3BM21 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.06□□□□□ -1.76
H3BM21 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.06□□□□□ -1.76
H3BM21 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.06□□□□□ -1.76
H3BM21 EIF4A1P12-201ENST00000551910 141 ntBASIC4.06□□□□□ -1.76
H3BM21 MIR4662B-201ENST00000579498 81 ntBASIC4.06□□□□□ -1.76
H3BM21 MIR4644-201ENST00000579929 84 ntBASIC4.06□□□□□ -1.76
H3BM21 MIR6500-201ENST00000622700 86 ntBASIC4.06□□□□□ -1.76
H3BM21 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
H3BM21 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
H3BM21 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H3BM21 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.06□□□□□ -1.76
H3BM21 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.06□□□□□ -1.76
H3BM21 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
H3BM21 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.05□□□□□ -1.76
H3BM21 NOL8P1-201ENST00000508336 3529 ntBASIC4.05□□□□□ -1.76
H3BM21 AC002543.1-201ENST00000299783 1954 ntBASIC4.05□□□□□ -1.76
H3BM21 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.05□□□□□ -1.76
H3BM21 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.05□□□□□ -1.76
H3BM21 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H3BM21 RNU1-133P-201ENST00000364867 167 ntBASIC4.05□□□□□ -1.76
H3BM21 Y_RNA.426-201ENST00000384068 113 ntBASIC4.05□□□□□ -1.76
H3BM21 RNU6-1181P-201ENST00000384191 106 ntBASIC4.05□□□□□ -1.76
H3BM21 MIR325-201ENST00000385260 98 ntBASIC4.05□□□□□ -1.76
H3BM21 RNU6ATAC-201ENST00000408749 126 ntBASIC4.05□□□□□ -1.76
H3BM21 CYCSP19-201ENST00000411715 316 ntBASIC4.05□□□□□ -1.76
H3BM21 AC006011.1-201ENST00000442758 349 ntBASIC4.05□□□□□ -1.76
H3BM21 SNORD11-201ENST00000459124 84 ntBASIC4.05□□□□□ -1.76
H3BM21 RNU2-44P-201ENST00000516795 194 ntBASIC4.05□□□□□ -1.76
H3BM21 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.05□□□□□ -1.76
H3BM21 AC105137.2-201ENST00000569073 466 ntBASIC4.05□□□□□ -1.76
H3BM21 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
H3BM21 AL929325.1-201ENST00000603096 117 ntBASIC4.05□□□□□ -1.76
H3BM21 FTX_3.1-201ENST00000610451 147 ntBASIC4.05□□□□□ -1.76
H3BM21 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.05□□□□□ -1.76
H3BM21 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms