Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-890P-201ENST00000384121 107 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-1013P-201ENST00000384180 107 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-784P-201ENST00000384330 106 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.509-201ENST00000384506 99 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 BTF3L4P2-201ENST00000392798 346 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 CYCSP49-201ENST00000420810 319 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 HMGN2P23-201ENST00000456759 269 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MIR2053-201ENST00000459295 91 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC087477.1-201ENST00000465747 340 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 RPL22P13-201ENST00000493291 347 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 RNA5SP137-201ENST00000516833 135 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 RNU1-54P-201ENST00000517181 120 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MIR3126-201ENST00000577443 74 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MIR4299-201ENST00000577899 72 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC025754.2-201ENST00000606491 432 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC096772.1-201ENST00000609146 564 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MIR1244-1-201ENST00000612829 85 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 AC007792.1-201ENST00000623023 402 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MIR1244-3-201ENST00000635744 85 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MIR1244-2-201ENST00000636449 85 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MIR1244-4-202ENST00000636813 85 ntBASIC1.58□□□□□ -2.16
TRIM49D1C9J1S8 MTND5P9-201ENST00000503854 1755 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.2-201ENST00000362330 96 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 SNORD32B-201ENST00000364460 84 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.263-201ENST00000364659 114 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 MIR95-201ENST00000385072 81 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 MIR208B-201ENST00000401172 77 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 MIR1262-201ENST00000408276 93 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 RNA5SP494-201ENST00000410653 129 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 RNU2-41P-201ENST00000410991 178 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AL139396.1-201ENST00000421137 167 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 DAP3P1-201ENST00000441522 278 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.661-201ENST00000516003 99 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-991P-201ENST00000516168 107 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-667P-201ENST00000517186 102 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-586P-201ENST00000517265 104 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC021231.3-201ENST00000558497 370 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 MIR4769-201ENST00000584126 77 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AL355297.2-201ENST00000604792 129 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC018889.1-201ENST00000605372 397 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 LARP7P1-201ENST00000605576 316 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC104985.2-201ENST00000620598 500 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AL359697.1-201ENST00000624879 587 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 ZNF702P-202ENST00000434269 1966 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 MTND4P29-201ENST00000503122 1372 ntBASIC1.57□□□□□ -2.16
TRIM49D1C9J1S8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AC233981.2-201ENST00000611524 1614 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 SNORA18.2-201ENST00000383865 132 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-1009P-201ENST00000390996 107 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 HMGN2P39-201ENST00000398005 273 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 RNU2-32P-201ENST00000411193 191 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AF228730.4-201ENST00000421457 183 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 BX510359.4-201ENST00000423750 193 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AC096920.1-201ENST00000423991 241 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AL161788.1-201ENST00000441805 169 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 CHEK2P4-201ENST00000450340 246 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 RPL30P15-201ENST00000457129 321 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.635-201ENST00000459041 101 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AC016632.1-201ENST00000503994 196 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AC105758.1-201ENST00000506038 399 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 RNU6-548P-201ENST00000517083 115 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 MIR5696-201ENST00000578474 85 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 C8orf59P2-201ENST00000603441 271 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AL355802.3-201ENST00000607571 545 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 PCGEM1.1-201ENST00000613431 131 ntBASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
TRIM49D1C9J1S8 AC006026.1-201ENST00000444025 1803 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.315-201ENST00000365117 102 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 SNORA25B-201ENST00000365507 128 ntBASIC1.55□□□□□ -2.16
TRIM49D1C9J1S8 Y_RNA.405-201ENST00000383979 100 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms