Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.64□□□□□ -2.51
COL6A5A8TX70 AC012308.1-201ENST00000451232 178 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 SNORA70.12-201ENST00000516084 153 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.64□□□□□ -2.51
COL6A5A8TX70 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.64□□□□□ -2.51
COL6A5A8TX70 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.64□□□□□ -2.51
COL6A5A8TX70 RNA5SP163-201ENST00000410304 99 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-0.65□□□□□ -2.51
COL6A5A8TX70 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AC003071.1-201ENST00000451219 789 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AC079354.2-201ENST00000453523 154 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AC010493.1-201ENST00000513479 292 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AC022616.2-201ENST00000523185 300 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.65□□□□□ -2.51
COL6A5A8TX70 RMST_5.1-201ENST00000618704 126 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AC106754.1-201ENST00000562632 1513 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 MIR548B-201ENST00000385247 97 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 RNA5SP86-201ENST00000390869 98 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AL133475.1-201ENST00000404414 305 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.65□□□□□ -2.51
COL6A5A8TX70 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.65□□□□□ -2.51
COL6A5A8TX70 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.65□□□□□ -2.51
COL6A5A8TX70 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
COL6A5A8TX70 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 MIR527-201ENST00000385244 85 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 RNU6-679P-201ENST00000391003 106 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 BEND7P1-201ENST00000422058 457 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.66□□□□□ -2.51
COL6A5A8TX70 AC002486.1-201ENST00000435098 391 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 RNU7-134P-201ENST00000458997 64 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.66□□□□□ -2.51
COL6A5A8TX70 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 MTND4LP26-201ENST00000518144 282 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.66□□□□□ -2.51
COL6A5A8TX70 AC100767.1-201ENST00000528178 123 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 AC109446.1-201ENST00000566172 220 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.66□□□□□ -2.51
COL6A5A8TX70 MIR499B-201ENST00000636498 73 ntBASIC-0.66□□□□□ -2.51
COL6A5A8TX70 SNORA2.1-201ENST00000363089 137 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 MIR454-201ENST00000390180 115 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.66□□□□□ -2.52
COL6A5A8TX70 USP9YP16-201ENST00000430287 407 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 AL592447.1-201ENST00000447592 540 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.66□□□□□ -2.52
COL6A5A8TX70 RPL21P9-201ENST00000556149 474 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 AL109620.1-201ENST00000618738 1197 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 AP002371.2-201ENST00000624450 503 ntBASIC-0.66□□□□□ -2.52
COL6A5A8TX70 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
COL6A5A8TX70 RNU6-179P-201ENST00000363350 107 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 MIR204-201ENST00000385200 110 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 MIR513C-201ENST00000401352 84 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AL008629.1-201ENST00000438615 184 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AL606517.2-201ENST00000442855 241 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.67□□□□□ -2.52
COL6A5A8TX70 snoU13.27-201ENST00000459278 104 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AP002371.1-201ENST00000463604 433 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AC074133.1-201ENST00000515696 183 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.67□□□□□ -2.52
COL6A5A8TX70 MIR3179-1-201ENST00000578940 84 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 MIR3179-2-201ENST00000579107 84 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 MIR3179-3-201ENST00000579566 84 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AL022067.1-201ENST00000602426 454 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 MIR3179-4-201ENST00000617599 84 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AC009318.4-201ENST00000620496 486 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AC104985.3-201ENST00000623479 597 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AL133264.1-201ENST00000407157 562 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AC123900.1-201ENST00000420390 96 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RPL26P6-201ENST00000440913 438 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 SUMO1P2-201ENST00000452524 304 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RPL39P38-201ENST00000467018 153 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AC097462.1-201ENST00000514125 324 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RNU6-848P-201ENST00000515948 107 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RNU6-617P-201ENST00000516147 107 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RNU6-473P-201ENST00000516164 107 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms