Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 U8.5-201ENST00000364528 136 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 RNU6-331P-201ENST00000384724 107 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 AL356583.2-201ENST00000426536 280 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 NFU1P2-201ENST00000448700 469 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 MIR548AO-201ENST00000579992 96 ntBASIC-0.37□□□□□ -2.47
CNOT1A5YKK6 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 SNORA75B-201ENST00000384053 137 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 RNU2-59P-201ENST00000410482 191 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 RNU6-77P-201ENST00000410554 91 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AC245047.3-201ENST00000429428 127 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 RNU6-416P-201ENST00000516265 103 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 SNORA18.7-201ENST00000516910 131 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AC011921.3-201ENST00000605540 361 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 MIR3529-201ENST00000637713 78 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 RNU6-199P-201ENST00000362954 107 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 RNU6-622P-201ENST00000384272 103 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 SNORA8.2-201ENST00000384372 139 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 PCNPP3-201ENST00000393579 471 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AL133264.1-201ENST00000407157 562 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AC068533.2-201ENST00000411872 306 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 MTCO3P41-201ENST00000414801 328 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AC027288.2-201ENST00000553028 243 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 MIR3115-201ENST00000577915 68 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 MIR548AD-201ENST00000584780 82 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 AL390123.1-201ENST00000603216 237 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 SUMO2P14-201ENST00000604488 293 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 BX322639.1-202ENST00000423987 2213 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 SEC63P2-201ENST00000503863 1939 ntBASIC-0.38□□□□□ -2.47
CNOT1A5YKK6 SNORD32B-201ENST00000364460 84 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 RNU6-534P-201ENST00000364877 106 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 MIR496-201ENST00000385226 102 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AL359634.1-202ENST00000404721 284 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 MTND1P21-201ENST00000412991 285 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AL139421.1-201ENST00000423010 169 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 MTCO1P5-201ENST00000433573 344 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC093019.1-201ENST00000443135 252 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 SNORD54-201ENST00000459159 67 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AL163973.1-201ENST00000484753 577 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC023050.3-201ENST00000541142 333 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AK6P2-201ENST00000549020 471 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC025678.1-201ENST00000567861 338 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC011451.2-201ENST00000604303 598 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AL670379.3-201ENST00000605040 251 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC122133.1-201ENST00000613964 233 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC024940.5-201ENST00000622889 474 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 MTND4P21-201ENST00000453886 1357 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 RNU4-84P-201ENST00000364200 139 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 RNU6-994P-201ENST00000410507 111 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 COX7BP2-201ENST00000437976 242 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC073910.1-201ENST00000445047 438 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 PCNPP5-201ENST00000452246 481 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 RPL17P19-201ENST00000489069 552 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 RN7SKP164-201ENST00000516138 266 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 MTND2P7-201ENST00000521337 640 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AC100830.2-201ENST00000581636 240 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 AL162424.1-201ENST00000602325 221 ntBASIC-0.39□□□□□ -2.47
CNOT1A5YKK6 SNORA72.1-201ENST00000363485 129 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 RNU6-359P-201ENST00000365466 108 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AC007547.1-201ENST00000462177 490 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AC122134.1-202ENST00000569111 1201 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AC138915.2-201ENST00000569776 97 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 Z99497.2-201ENST00000603634 310 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 BCRP9-201ENST00000605312 388 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AL162376.1-201ENST00000624117 175 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AL359697.1-201ENST00000624879 587 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 U6.108-201ENST00000637764 58 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AL663109.1-201ENST00000411498 844 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AC027644.1-201ENST00000419595 298 ntBASIC-0.4□□□□□ -2.47
CNOT1A5YKK6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms