Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 Y_RNA.132-201ENST00000363421 102 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 SNORD115-32-201ENST00000364079 82 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 SNORD114-6-201ENST00000364393 72 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 SNORA40.19-201ENST00000390846 128 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 USMG5P1-201ENST00000425964 177 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 HMGN2P3-201ENST00000433603 273 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 HMGN2P5-201ENST00000436882 273 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU7-87P-201ENST00000459343 62 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC007215.1-201ENST00000464893 276 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 SNORA25.14-201ENST00000516481 132 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 Y_RNA.706-201ENST00000516933 99 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC092794.2-201ENST00000620933 563 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR1302-1-201ENST00000637932 143 ntBASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC196A0A1B0GTZ2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU1-58P-201ENST00000362413 163 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-222P-201ENST00000362438 107 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNY1P16-201ENST00000363063 111 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-727P-201ENST00000363592 107 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 Y_RNA.356-201ENST00000365475 113 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-418P-201ENST00000384035 107 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNY3P14-201ENST00000384309 102 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU2-2P-201ENST00000410396 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RN7SKP284-201ENST00000411002 343 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNA5SP450-201ENST00000411206 102 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC093019.1-201ENST00000443135 252 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AP000870.1-201ENST00000472927 406 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RRN3P3-201ENST00000549207 578 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC027288.2-201ENST00000553028 243 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR5089-201ENST00000580047 84 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR3935-201ENST00000583472 104 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR4753-201ENST00000585119 83 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC012493.3-201ENST00000604494 112 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC113139.1-201ENST00000605049 239 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.15-201ENST00000611544 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.16-201ENST00000613119 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.12-201ENST00000613778 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.20-201ENST00000613956 192 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.9-201ENST00000615427 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.11-201ENST00000616345 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.2-201ENST00000616535 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.3-201ENST00000617785 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.19-201ENST00000618602 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU2-1-201ENST00000618664 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.6-201ENST00000619225 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.5-201ENST00000619465 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 U2.10-201ENST00000620268 191 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 LINC02555-201ENST00000563933 1951 ntBASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC196A0A1B0GTZ2 BX322639.1-202ENST00000423987 2213 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-873P-201ENST00000363833 107 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-17P-201ENST00000384245 107 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 Y_RNA.474-201ENST00000384341 102 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-18P-201ENST00000384527 107 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-700P-201ENST00000391043 107 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR1283-1-201ENST00000408494 87 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR1283-2-201ENST00000408621 87 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC092423.1-201ENST00000430165 186 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC009237.7-201ENST00000447357 229 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 MTND5P20-201ENST00000448677 143 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RPL30P15-201ENST00000457129 321 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RPS29P21-201ENST00000496272 170 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-120P-201ENST00000516077 103 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNU6-875P-201ENST00000516488 106 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 Y_RNA.702-201ENST00000516843 96 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNA5SP54-201ENST00000516951 92 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC134698.4-201ENST00000523451 826 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 APOOP3-201ENST00000536787 586 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 FRG2DP-202ENST00000566967 323 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR4287-201ENST00000579398 78 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 MIR5695-201ENST00000579717 85 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC100812.1-201ENST00000607622 580 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 Y_RNA.804-201ENST00000615262 101 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 MTND4LP32-201ENST00000636111 270 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 ZNF702P-202ENST00000434269 1966 ntBASIC2.29□□□□□ -2.04
CCDC196A0A1B0GTZ2 Y_RNA.106-201ENST00000363189 100 ntBASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 RNA5SP493-201ENST00000364115 91 ntBASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 AL033519.2-201ENST00000403958 392 ntBASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC096920.1-201ENST00000423991 241 ntBASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 MTND3P23-201ENST00000431980 347 ntBASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC196A0A1B0GTZ2 AC016925.1-201ENST00000458303 298 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms