Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC139712.2-201ENST00000424302 339 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 MTCO3P29-201ENST00000432119 779 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 MTCO3P8-201ENST00000453691 755 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP233-201ENST00000459153 113 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 RNU7-14P-201ENST00000459331 62 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-120P-201ENST00000516077 103 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 RNVU1-2-201ENST00000516326 135 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-1213P-201ENST00000517075 94 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC087441.2-201ENST00000529141 262 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 MIR4790-201ENST00000577799 79 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 FGF7P1-201ENST00000582820 288 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AL096840.1-201ENST00000603287 93 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC005520.5-201ENST00000613926 164 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC233981.2-201ENST00000611524 1614 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 AC245060.5-201ENST00000610778 3293 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.160-201ENST00000363677 92 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP493-201ENST00000364115 91 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.332-201ENST00000365271 113 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.339-201ENST00000365325 102 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-933P-201ENST00000384424 107 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 RNU11-3P-201ENST00000391111 133 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-876P-201ENST00000391295 104 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP118-201ENST00000410385 109 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AL590556.1-201ENST00000423231 483 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AL354695.1-201ENST00000427935 228 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 MTATP6P13-201ENST00000438531 667 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AL353572.1-201ENST00000442490 417 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.670-201ENST00000516255 105 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 RNU7-30P-201ENST00000516835 62 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AL161670.1-201ENST00000554348 137 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 SUB1P3-201ENST00000564581 315 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 MIR3169-201ENST00000578032 83 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 POLR3GP2-201ENST00000588366 668 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AC124303.1-201ENST00000605703 360 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 AC093913.1-201ENST00000614178 329 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
TRAV40A0A0B4J280 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 CBX3P1-201ENST00000325243 554 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.279-201ENST00000364763 95 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.303-201ENST00000364998 94 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-418P-201ENST00000384035 107 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 MIR32-201ENST00000384965 70 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 MIR1304-201ENST00000408243 91 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 MIR548K-201ENST00000408406 116 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-321P-201ENST00000410912 106 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP501-201ENST00000410990 112 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 MTND3P8-201ENST00000412909 339 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC004965.1-201ENST00000413033 213 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC009161.1-201ENST00000417306 376 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RPS3AP52-201ENST00000435639 297 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 MTND4LP16-201ENST00000440828 295 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC004386.2-201ENST00000441858 148 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AL035666.1-201ENST00000446195 348 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC016717.1-201ENST00000448918 286 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RPL23AP3-201ENST00000453844 468 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC010531.2-201ENST00000465012 153 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RPL7P42-201ENST00000481005 679 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC026782.1-201ENST00000512952 449 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.675-201ENST00000516389 149 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RNU5F-4P-201ENST00000516581 114 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP384-201ENST00000516615 116 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 CBX3P8-201ENST00000532412 525 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 UBL5P4-201ENST00000562584 236 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AC026271.5-201ENST00000577873 130 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AL359821.1-201ENST00000605519 182 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 AP000654.2-201ENST00000605633 586 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 U6atac.1-201ENST00000616025 117 ntBASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
TRAV40A0A0B4J280 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AL391987.6-201ENST00000305671 199 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 RNU1-76P-201ENST00000362903 159 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms