Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC020661.2-201ENST00000560114 134 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 AC006600.1-201ENST00000572529 153 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 MIR4719-201ENST00000585233 84 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 AL356575.1-201ENST00000603008 283 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 TCL6_2.1-201ENST00000615162 119 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 U2.1-201ENST00000618978 145 ntBASIC2.4□□□□□ -2.03
CLDN16Q9Y5I7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-873P-201ENST00000363833 107 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 RNU1-115P-201ENST00000365329 160 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 SNORA67.4-201ENST00000384688 142 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 RNA5SP210-201ENST00000391034 120 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MCFD2P1-201ENST00000417812 300 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AL160004.2-201ENST00000432935 350 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AC009238.1-201ENST00000442165 424 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MTND4P19-201ENST00000446659 478 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AC009237.6-201ENST00000446969 424 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MTCO3P8-201ENST00000453691 755 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 SRIP1-201ENST00000489235 288 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 RPS23P5-201ENST00000495419 428 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 SNORA25.10-201ENST00000515926 124 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 ANP32BP3-201ENST00000559213 706 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MIR3670-2-201ENST00000582974 65 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MIR3670-1-201ENST00000584160 65 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MIR3670-3-201ENST00000584855 65 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 SNORD14A-201ENST00000606526 91 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MIR3670-4-201ENST00000612260 65 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 MIR6817-201ENST00000615588 66 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 AC243829.7-201ENST00000633081 225 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 BX322639.1-202ENST00000423987 2213 ntBASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLDN16Q9Y5I7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 XGY1-201ENST00000381172 446 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 SNORA22B-201ENST00000383876 138 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 MIR10B-201ENST00000385011 110 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 MIR27B-201ENST00000385129 97 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 U8.22-201ENST00000459141 133 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 SNORA59A-201ENST00000459326 152 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 RNA5SP148-201ENST00000516527 94 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 AC022616.8-201ENST00000533569 253 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 ELOCP31-201ENST00000540463 467 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 AL442663.2-201ENST00000554385 511 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 AC009127.3-201ENST00000570531 403 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 RPL17P51-201ENST00000605218 238 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 AL138825.1-201ENST00000618587 192 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 AC091925.1-201ENST00000623204 462 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 AL606534.2-204ENST00000635008 178 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.38□□□□□ -2.03
CLDN16Q9Y5I7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-234P-201ENST00000365229 104 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-245P-201ENST00000384020 107 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 MIR196B-201ENST00000384852 84 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RNU1-139P-201ENST00000391307 165 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 MTCYBP6-201ENST00000441810 138 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RNU7-14P-201ENST00000459331 62 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RNU4-77P-201ENST00000516692 156 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 MIR2355-201ENST00000517199 87 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AP003072.1-201ENST00000531740 145 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AC018630.3-201ENST00000542637 96 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AC093023.1-201ENST00000547375 507 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 MIR3126-201ENST00000577443 74 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 VN1R91P-201ENST00000594377 169 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AC078899.2-201ENST00000595282 212 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AC016925.2-201ENST00000605108 242 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 MIR4272-201ENST00000635924 64 ntBASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CLDN16Q9Y5I7 AL136360.1-201ENST00000503377 1900 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms