Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 Y_RNA.451-201ENST00000384200 100 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.524-201ENST00000384564 100 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.561-201ENST00000384694 100 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 HMGN2P3-201ENST00000433603 273 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 HMGN2P5-201ENST00000436882 273 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AL121594.1-201ENST00000475906 575 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 RNU6-1198P-201ENST00000516904 67 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 CYP4A27P-201ENST00000567218 190 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 MIR3923-201ENST00000579521 83 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 Z98751.3-201ENST00000604447 521 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AL355297.2-201ENST00000604792 129 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AL670379.2-201ENST00000604983 252 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AC006157.1-201ENST00000611750 366 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AL138825.1-201ENST00000618587 192 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AC008121.3-201ENST00000618726 433 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AC091925.1-201ENST00000623204 462 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AL450472.1-202ENST00000637286 180 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 AC099654.10-201ENST00000640395 161 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.31-201ENST00000362574 102 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 SNORA25.6-201ENST00000364121 118 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 MIR153-2-201ENST00000385225 87 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 AF186996.7-201ENST00000492781 209 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 AC105758.1-201ENST00000506038 399 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 SNORA25.10-201ENST00000515926 124 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 SNORA31.16-201ENST00000516773 139 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 AL049779.4-201ENST00000604500 156 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 MIR6873-201ENST00000622788 63 ntBASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CDK11AQ9UQ88 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.39-201ENST00000362620 98 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 SNORA36A-201ENST00000384221 132 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MIR32-201ENST00000384965 70 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 RNU6-308P-201ENST00000390957 107 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MIR190B-201ENST00000401119 79 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MCFD2P1-201ENST00000417812 300 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MRPS18CP6-201ENST00000423587 223 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 Z82188.1-201ENST00000436709 154 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AL161788.1-201ENST00000441805 169 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC011753.1-201ENST00000451001 220 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 OR2AQ1P-201ENST00000451972 200 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC090515.1-201ENST00000465295 476 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC107222.1-201ENST00000510899 637 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 HSPE1P18-201ENST00000517602 280 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC015712.3-201ENST00000559380 164 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC010928.2-201ENST00000588017 287 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC092447.9-201ENST00000603395 144 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AL713866.2-201ENST00000603579 219 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC016925.2-201ENST00000605108 242 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MIR1244-1-201ENST00000612829 85 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MIR1244-3-201ENST00000635744 85 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MIR1244-2-201ENST00000636449 85 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 MIR1244-4-202ENST00000636813 85 ntBASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK11AQ9UQ88 SNORA22B-201ENST00000383876 138 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 MIR95-201ENST00000385072 81 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 SNORA69.1-201ENST00000390904 137 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.605-201ENST00000410577 105 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 RPS26P42-201ENST00000413485 326 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AL590556.1-201ENST00000423231 483 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 MTCO3P29-201ENST00000432119 779 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AL591806.2-201ENST00000433122 173 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 IFNA11P-201ENST00000446352 526 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 RPL30P11-203ENST00000598995 310 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 AC010297.1-201ENST00000623948 149 ntBASIC3.62□□□□□ -1.83
CDK11AQ9UQ88 RNU6-1032P-201ENST00000384100 107 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 RNU6-17P-201ENST00000384245 107 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 RNY1P14-201ENST00000384426 108 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.496-201ENST00000384444 101 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 RNU6-18P-201ENST00000384527 107 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 RNU6-541P-201ENST00000384709 110 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 MTND4P19-201ENST00000446659 478 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 SNORA48.11-201ENST00000517015 89 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 GNAI2P1-201ENST00000541815 315 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 AC009127.3-201ENST00000570531 403 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 AC006504.6-201ENST00000590142 199 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 AL078605.1-201ENST00000603529 500 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 AL355802.3-201ENST00000607571 545 ntBASIC3.61□□□□□ -1.83
CDK11AQ9UQ88 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms