Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 Y_RNA.341-201ENST00000365341 102 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 MIR539-201ENST00000365690 78 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 Y_RNA.542-201ENST00000384641 111 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 MIR134-201ENST00000385258 73 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 RN7SKP27-201ENST00000410684 333 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 CYCSP4-201ENST00000429682 331 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 RPS3P1-201ENST00000456781 192 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 RNU6-1211P-201ENST00000459179 105 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 RPL32P34-201ENST00000486380 400 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 LARP7P3-201ENST00000579888 337 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 AC012442.3-202ENST00000636742 206 ntBASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
AP4E1Q9UPM8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 RNU6-199P-201ENST00000362954 107 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 U3.8-201ENST00000363675 217 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 RNU6-643P-201ENST00000384018 107 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 AL591034.1-201ENST00000407447 340 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 AC006461.1-201ENST00000412637 326 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 SNRPGP3-201ENST00000469405 227 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 MIR5688-201ENST00000580619 83 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 AL161912.2-201ENST00000565707 3007 ntBASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP4E1Q9UPM8 MFSD8-233ENST00000641482 4860 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 SNORD114-19-201ENST00000363072 75 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 RNU6-1205P-201ENST00000363625 106 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 RNU6-1210P-201ENST00000363775 107 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 Y_RNA.229-201ENST00000364347 113 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 RNU6-153P-201ENST00000364422 104 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 RNU6-407P-201ENST00000365280 104 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 RNU6-80P-201ENST00000384195 107 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 MT-TT-201ENST00000387460 66 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AL357552.1-201ENST00000445254 415 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AC010099.1-201ENST00000455434 375 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 RNU2-44P-201ENST00000516795 194 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AC025281.1-201ENST00000567026 265 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AC025754.2-201ENST00000606491 432 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 MIR6076-201ENST00000617521 113 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AC009093.8-201ENST00000641769 292 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AC010889.1-201ENST00000566193 2666 ntBASIC3.62□□□□□ -1.83
AP4E1Q9UPM8 AP003122.5-201ENST00000527668 3766 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 AC010680.1-201ENST00000590024 3590 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 RNU6-1325P-201ENST00000364905 105 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 MIR15B-201ENST00000385045 98 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 MIR548B-201ENST00000385247 97 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 AL121914.1-201ENST00000450188 156 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 AC106707.2-201ENST00000484182 374 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 Y_RNA.686-201ENST00000516548 134 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 AC026403.1-201ENST00000518938 295 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 AP000867.2-201ENST00000532468 320 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 AC034105.4-201ENST00000568304 277 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 MIR7851-201ENST00000610611 160 ntBASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
AP4E1Q9UPM8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 RNU6-655P-201ENST00000362858 107 ntBASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 SNORA73.2-201ENST00000364946 201 ntBASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 AP002088.1-201ENST00000382740 395 ntBASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 MIR147B-201ENST00000390185 80 ntBASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 AL365496.1-201ENST00000426885 215 ntBASIC3.6□□□□□ -1.83
AP4E1Q9UPM8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms