Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 MIR4782-201ENST00000577987 79 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 MIR548X2-201ENST00000579776 100 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AL109809.4-201ENST00000603520 2185 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 MIR410-201ENST00000362222 80 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.217-201ENST00000364214 105 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SNORD116-14-201ENST00000383894 92 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SNORD116-17-201ENST00000383929 92 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SNORD116-15-201ENST00000384445 92 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SNORD116-20-201ENST00000384529 92 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SNORD116-19-201ENST00000384729 92 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RNA5SP213-201ENST00000391031 106 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RPS29P6-201ENST00000438196 145 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SSXP4-201ENST00000451349 245 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.641-201ENST00000459414 105 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AC087588.1-201ENST00000462203 316 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AK3P2-201ENST00000507976 429 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RNU6-377P-201ENST00000515965 102 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RNA5SP170-201ENST00000517150 101 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AC009163.5-201ENST00000575421 637 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 MIR4431-201ENST00000579990 94 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RNU6-626P-201ENST00000363354 107 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SNORD115-8-201ENST00000363856 82 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RNA5SP99-201ENST00000364020 114 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 SNORD115-38-201ENST00000365037 82 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 MT-TT-201ENST00000387460 66 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 MIR1183-201ENST00000408856 89 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 MTCO1P44-201ENST00000441935 243 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 AC091959.1-201ENST00000495857 238 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 RNU6-453P-201ENST00000516819 85 ntBASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.11□□□□□ -2.07
NOTCH3Q9UM47 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 AC107027.3-201ENST00000565095 3473 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU1-75P-201ENST00000347264 129 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU6-222P-201ENST00000362438 107 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU6-989P-201ENST00000362756 107 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1155P-201ENST00000363554 107 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU1-112P-201ENST00000364401 164 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 SNORD14B-201ENST00000364533 90 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU6-741P-201ENST00000383889 107 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 SNORA46-201ENST00000384762 135 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 MIR135A2-201ENST00000384854 100 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 SNORA40.19-201ENST00000390846 128 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1025P-201ENST00000410629 104 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RPL23AP3-201ENST00000453844 468 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 AC091179.1-201ENST00000461606 579 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RPL23AP45-201ENST00000476406 468 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 CYCTP-201ENST00000504253 315 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 RNU7-121P-201ENST00000516604 62 ntBASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NOTCH3Q9UM47 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.33-201ENST00000362591 102 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-199P-201ENST00000362954 107 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-384P-201ENST00000364900 104 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1180P-201ENST00000364935 107 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-326P-201ENST00000365480 107 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC019155.1-201ENST00000382242 574 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-281P-201ENST00000384212 103 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1145P-201ENST00000384246 107 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU6-339P-201ENST00000384310 107 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNY4P30-201ENST00000410216 95 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC005042.3-201ENST00000453230 174 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 snoU13.18-201ENST00000459483 104 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 RNA5SP148-201ENST00000516527 94 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.709-201ENST00000516952 92 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 U4.7-201ENST00000638126 106 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 PHKBP1-201ENST00000450951 1951 ntBASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.09□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.121-201ENST00000363309 113 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms