Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 MIR3122-201ENST00000577243 73 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 MIR5692C1-201ENST00000585309 91 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AC016925.2-201ENST00000605108 242 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AL138726.1-201ENST00000614873 333 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CLIP2Q9UDT6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.09□□□□□ -2.08
CLIP2Q9UDT6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.09□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.148-201ENST00000363557 117 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1059P-201ENST00000363752 98 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.395-201ENST00000383945 109 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.404-201ENST00000383978 102 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RNU6-310P-201ENST00000384655 107 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 MIR568-201ENST00000385036 95 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RPL37P10-201ENST00000412884 288 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AL645568.3-201ENST00000433683 316 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AL137792.2-201ENST00000443484 235 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RPL30P15-201ENST00000457129 321 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.635-201ENST00000459041 101 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AC091885.1-201ENST00000506658 268 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RNU2-69P-201ENST00000516061 100 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RNU6-991P-201ENST00000516168 107 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AC026271.5-201ENST00000577873 130 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AC008737.2-201ENST00000599446 118 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AP000654.2-201ENST00000605633 586 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 AC103705.1-201ENST00000619013 241 ntBASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.08□□□□□ -2.08
CLIP2Q9UDT6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC121333.1-201ENST00000567488 2709 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.5-201ENST00000362334 102 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 SNORD56.1-201ENST00000362913 68 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.496-201ENST00000384444 101 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 RNU6-306P-201ENST00000384617 107 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC007969.2-201ENST00000441891 191 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 MTATP8P1-201ENST00000467115 207 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 RPL7P42-201ENST00000481005 679 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.661-201ENST00000516003 99 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 RNU6-189P-201ENST00000516120 101 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC007375.1-201ENST00000554513 578 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC023043.2-201ENST00000589678 1026 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC136443.5-201ENST00000603741 370 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 ELOCP5-201ENST00000604924 333 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 AC007485.1-201ENST00000616755 206 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 U4.7-201ENST00000638126 106 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
CLIP2Q9UDT6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.133-201ENST00000363428 110 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.197-201ENST00000364004 102 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.324-201ENST00000365165 102 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 RNA5SP190-201ENST00000365222 118 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 SNORD116-11-201ENST00000383882 92 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 MIR450B-201ENST00000401182 78 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 AC074085.1-201ENST00000413598 418 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 MTND3P2-201ENST00000438452 342 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 AC107399.1-201ENST00000451226 265 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 MTCO1P29-201ENST00000496868 288 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1170P-201ENST00000515974 106 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.670-201ENST00000516255 105 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1069P-201ENST00000516612 133 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1332P-201ENST00000516666 104 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 MIR4419B-201ENST00000577260 68 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 AC024614.2-201ENST00000577584 372 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 AC002044.1-201ENST00000606707 158 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 AL355802.3-201ENST00000607571 545 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 AL669831.3-213ENST00000636676 183 ntBASIC2.06□□□□□ -2.08
CLIP2Q9UDT6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1115P-201ENST00000362490 106 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 SNORD113-7-201ENST00000363762 77 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-234P-201ENST00000365229 104 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-890P-201ENST00000384121 107 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 Y_RNA.459-201ENST00000384251 102 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-601P-201ENST00000384540 107 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-331P-201ENST00000384724 107 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU6-1105P-201ENST00000384774 107 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 SNORD73A-201ENST00000386062 65 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 EIF4E2P1-201ENST00000393781 255 ntBASIC2.05□□□□□ -2.08
CLIP2Q9UDT6 RNU2-48P-201ENST00000410694 191 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms