Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL359075.3-201ENST00000613288 217 ntBASIC-0.02□□□□□ -2.41
COMMD3Q9UBI1 AC007742.2-201ENST00000618226 398 ntBASIC-0.02□□□□□ -2.41
COMMD3Q9UBI1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 RNA5SP219-201ENST00000390940 113 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 AL162725.1-201ENST00000435405 301 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 AC104332.1-201ENST00000440471 797 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 AC016717.1-201ENST00000448918 286 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 LINC01399-202ENST00000458450 244 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 AL121895.2-201ENST00000619558 447 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 AL356596.1-201ENST00000624230 379 ntBASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.03□□□□□ -2.41
COMMD3Q9UBI1 RNU4-67P-201ENST00000364569 141 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 MIR549A-201ENST00000385268 96 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 MIR1253-201ENST00000408273 105 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 MIR1287-201ENST00000408492 90 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AC114491.1-201ENST00000416095 246 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 OR9P1P-201ENST00000496431 281 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AC008628.2-201ENST00000502605 298 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 LRRC34P2-201ENST00000514850 553 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 SNORD111.1-201ENST00000516421 86 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AC023050.3-201ENST00000541142 333 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 MIR4514-201ENST00000581410 57 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 MIR4307-201ENST00000582802 84 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 SNORA4-201ENST00000584302 138 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AC008521.1-201ENST00000587471 187 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 Z99497.2-201ENST00000603634 310 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 SEPT14P17-201ENST00000617978 177 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AL512427.1-201ENST00000618593 349 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AC006001.4-201ENST00000622243 395 ntBASIC-0.04□□□□□ -2.42
COMMD3Q9UBI1 AP000568.1-201ENST00000282964 442 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 RNA5SP264-201ENST00000363115 107 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 SNORA24.1-201ENST00000384401 135 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 CDK8P2-201ENST00000415020 547 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC016909.1-201ENST00000415916 166 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC093019.1-201ENST00000443135 252 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC079382.1-201ENST00000493346 557 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 CYCTP-201ENST00000504253 315 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC010486.2-201ENST00000505572 483 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC025465.4-201ENST00000513422 638 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 RNU7-128P-201ENST00000517247 62 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AP003716.2-201ENST00000528260 108 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC023827.1-201ENST00000569247 97 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC023932.2-201ENST00000603176 175 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AC121334.2-201ENST00000605387 271 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 MIR6515-201ENST00000619843 57 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 SNORA43.4-201ENST00000629559 138 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 AL390237.1-201ENST00000404226 1415 ntBASIC-0.05□□□□□ -2.42
COMMD3Q9UBI1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 SNORA63.3-201ENST00000362682 132 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 SNORD56.2-201ENST00000363242 71 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 SNORA42.1-201ENST00000363515 137 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 RNU6-387P-201ENST00000411331 105 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AL117339.3-201ENST00000418733 162 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC090960.1-201ENST00000421072 306 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC012306.1-201ENST00000423267 114 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 STAG3L5P-204ENST00000443759 179 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 SNRPGP12-201ENST00000449481 213 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 SNORA62.5-201ENST00000516634 120 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 RNU6-685P-201ENST00000517088 95 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC022616.6-201ENST00000520479 119 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AP003327.1-201ENST00000529684 127 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 EIF1P4-201ENST00000572664 335 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 MIR3118-1-201ENST00000581787 76 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC112187.2-201ENST00000604345 283 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AL158042.1-201ENST00000605338 460 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 AC005562.2-201ENST00000618264 111 ntBASIC-0.06□□□□□ -2.42
COMMD3Q9UBI1 MIR4315-1-201ENST00000636800 73 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms