Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 MTCYBP18-201ENST00000501056 747 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 SNORA44.1-201ENST00000517031 108 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1314P-201ENST00000517139 104 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 POLR3GP2-201ENST00000588366 668 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 AC009033.1-201ENST00000624279 431 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-862P-201ENST00000362804 105 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 SNORD116-11-201ENST00000383882 92 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 MIR487A-201ENST00000385009 80 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 RNA5SP118-201ENST00000410385 109 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 RPL21P111-201ENST00000418453 477 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 Z82205.1-201ENST00000428456 297 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 NFU1P2-201ENST00000448700 469 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 HMGN2P23-201ENST00000456759 269 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 RPS29P25-201ENST00000481709 171 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-948P-201ENST00000516374 107 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 SNORA59B-202ENST00000578183 701 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 MIR3942-201ENST00000585264 109 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 AC069114.2-201ENST00000604699 304 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 AC019193.3-201ENST00000609144 554 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.64□□□□□ -2.15
ZCCHC3Q9NUD5 Y_RNA.157-201ENST00000363638 102 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 SNORD115-8-201ENST00000363856 82 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 Y_RNA.295-201ENST00000364918 102 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU4-9P-201ENST00000364951 139 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 SNORD115-38-201ENST00000365037 82 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-439P-201ENST00000384188 106 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-975P-201ENST00000384296 105 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1215P-201ENST00000384441 102 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 MIR586-201ENST00000385035 97 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 MIR30A-201ENST00000385092 71 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 SNORA40.18-201ENST00000391200 128 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AL117342.1-201ENST00000404861 406 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AC060773.1-201ENST00000421698 310 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AC112492.4-201ENST00000456549 352 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AC114982.1-201ENST00000469402 321 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 UBL5P3-201ENST00000475112 231 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 HMGN2P9-201ENST00000476875 229 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 ACA59.1-201ENST00000515966 143 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU1-41P-201ENST00000516161 162 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-864P-201ENST00000516256 108 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 RNU1-48P-201ENST00000516400 162 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AC010928.2-201ENST00000588017 287 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AC124303.1-201ENST00000605703 360 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AL353149.1-201ENST00000610667 244 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 AC090517.2-201ENST00000614966 680 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.63□□□□□ -2.15
ZCCHC3Q9NUD5 ZNF204P-201ENST00000416749 2397 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 SNORD115-32-201ENST00000364079 82 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 SNORA67.2-201ENST00000384300 149 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 MIR320B2-201ENST00000408479 138 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-1148P-201ENST00000410992 104 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 AC245047.4-201ENST00000433189 144 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 RPL23AP63-201ENST00000498752 471 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 AC011406.1-201ENST00000512440 370 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 RNA5SP54-201ENST00000516951 92 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 AC068205.3-201ENST00000636385 468 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 MIR3688-2-201ENST00000636963 87 ntBASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.62□□□□□ -2.15
ZCCHC3Q9NUD5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 RNU1-96P-201ENST00000364163 162 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-831P-201ENST00000384548 107 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC009161.1-201ENST00000417306 376 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 Z82188.1-201ENST00000436709 154 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 UBE2V1P8-201ENST00000437166 265 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC016717.1-201ENST00000448918 286 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 AC027575.1-201ENST00000481064 460 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 Y_RNA.655-201ENST00000515919 96 ntBASIC1.61□□□□□ -2.15
ZCCHC3Q9NUD5 RNA5SP384-201ENST00000516615 116 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms