Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC109446.1-201ENST00000566172 220 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 CYP4A27P-201ENST00000567218 190 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 MIR3169-201ENST00000578032 83 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 AC010900.2-201ENST00000604508 210 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 BX248123.2-201ENST00000606318 124 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 AL138726.1-201ENST00000614873 333 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 AC006504.8-201ENST00000621046 635 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 AC100810.6-201ENST00000638068 285 ntBASIC1.72□□□□□ -2.13
CCSER1Q9C0I3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
CCSER1Q9C0I3 RNU6-661P-201ENST00000362409 107 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 RNU6-227P-201ENST00000362865 103 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 U8.10-201ENST00000384260 133 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 SNORA12-201ENST00000391162 147 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 AC092473.1-201ENST00000441098 221 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 RPS29P27-201ENST00000463711 170 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 MTCO1P29-201ENST00000496868 288 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 AC114801.2-201ENST00000503825 781 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 AC091874.1-201ENST00000511402 339 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 CPDP1-201ENST00000579660 283 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 MIR3672-201ENST00000584290 82 ntBASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCSER1Q9C0I3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 Y_RNA.303-201ENST00000364998 94 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 MIR320A-201ENST00000385302 82 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 RNA5SP201-201ENST00000410316 124 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 RNU6-325P-201ENST00000411132 105 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 RPL30P16-201ENST00000419341 429 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 RBMX2P4-201ENST00000441256 376 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 NFU1P2-201ENST00000448700 469 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AC096745.1-201ENST00000509945 370 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 SNORA31.16-201ENST00000516773 139 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AF235103.2-201ENST00000525753 346 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AC023043.2-201ENST00000589678 1026 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AL590240.4-201ENST00000616908 390 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AC009033.1-201ENST00000624279 431 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 SNORA43.4-201ENST00000629559 138 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 AL450472.1-202ENST00000637286 180 ntBASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCSER1Q9C0I3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 RNU6-562P-201ENST00000362731 107 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 RNU6-831P-201ENST00000384548 107 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AC108667.1-201ENST00000428618 249 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 RNU1-98P-201ENST00000458992 160 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 RNU6-864P-201ENST00000516256 108 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 RNU6-358P-201ENST00000516564 75 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AC018638.8-201ENST00000588755 281 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 AC009541.1-201ENST00000438279 2662 ntBASIC1.69□□□□□ -2.14
CCSER1Q9C0I3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 SNORD116-11-201ENST00000383882 92 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 RNU6-95P-201ENST00000384697 107 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 RNA5SP100-201ENST00000410903 110 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 RNA5SP59-201ENST00000410922 110 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MTND3P9-201ENST00000429526 346 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MTATP6P13-201ENST00000438531 667 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MTND1P11-201ENST00000456661 876 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 RNU7-187P-201ENST00000458985 68 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 RNA5SP458-201ENST00000516188 119 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 SUMO2P18-201ENST00000518873 252 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 AC016256.1-201ENST00000547971 354 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MIR4303-201ENST00000581299 66 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MIR3942-201ENST00000585264 109 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 AC078795.3-201ENST00000602913 472 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 AL133215.3-201ENST00000609801 448 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MIR8076-201ENST00000611401 83 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms