Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SNORD79.1-201ENST00000516069 84 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 RNU6-947P-201ENST00000516264 106 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AL590705.4-201ENST00000532209 134 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AL121579.1-201ENST00000555129 305 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 MIR4778-201ENST00000577635 80 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AC080078.2-201ENST00000603766 501 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AP000907.4-201ENST00000604143 237 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 uc_338.11-201ENST00000619132 160 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 MIR8054-201ENST00000620877 86 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AC068792.1-201ENST00000621354 417 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 AC091895.1-201ENST00000624494 256 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 SNORD3E-202ENST00000627253 216 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 U6.108-201ENST00000637764 58 ntBASIC0.55□□□□□ -2.32
NKX6-2Q9C056 MIR608-201ENST00000384820 100 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 RNA5SP213-201ENST00000391031 106 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 MIR942-201ENST00000401111 86 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 RN7SKP200-201ENST00000410564 320 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AC004941.2-201ENST00000427009 228 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.54□□□□□ -2.32
NKX6-2Q9C056 MTCO2P3-201ENST00000442543 421 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 RNU7-57P-201ENST00000459540 60 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 SRRM1P2-201ENST00000464531 1192 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.54□□□□□ -2.32
NKX6-2Q9C056 RPL23AP94-201ENST00000512518 302 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AC025465.4-201ENST00000513422 638 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.54□□□□□ -2.32
NKX6-2Q9C056 RNU1-142P-201ENST00000516682 145 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AC136628.3-201ENST00000521868 290 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 CBX3P8-201ENST00000532412 525 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AC068790.6-201ENST00000602558 258 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 U2.17-201ENST00000611454 95 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 AC005858.4-201ENST00000623191 700 ntBASIC0.54□□□□□ -2.32
NKX6-2Q9C056 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
NKX6-2Q9C056 RNU6-227P-201ENST00000362865 103 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 RNU4-76P-201ENST00000364509 141 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 Y_RNA.399-201ENST00000383955 105 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 MIR586-201ENST00000385035 97 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 SNORD41-201ENST00000386967 70 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 RNU6-1106P-201ENST00000390845 107 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 SNORD12-201ENST00000391002 90 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 CDK8P2-201ENST00000415020 547 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.53□□□□□ -2.32
NKX6-2Q9C056 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 Z99497.1-201ENST00000421282 135 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.53□□□□□ -2.32
NKX6-2Q9C056 SNORA59A-201ENST00000459326 152 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 HMGB1P29-201ENST00000505659 499 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 SNORA18.6-201ENST00000516792 115 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 RNU1-117P-201ENST00000517041 158 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 MTND2P32-201ENST00000521584 1038 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AP002963.1-201ENST00000530590 184 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AC008015.1-201ENST00000555505 465 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.53□□□□□ -2.32
NKX6-2Q9C056 MIR3945-201ENST00000581853 98 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.53□□□□□ -2.32
NKX6-2Q9C056 BNIP3P39-201ENST00000601077 554 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AC068790.2-201ENST00000602601 557 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AL513534.2-201ENST00000603836 250 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 GHRLOS.1-201ENST00000610995 70 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AC108706.1-201ENST00000611053 297 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 RMST_3.1-201ENST00000611651 109 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AL359075.3-201ENST00000613288 217 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AP001506.1-201ENST00000615444 211 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AL078596.1-201ENST00000624856 447 ntBASIC0.53□□□□□ -2.32
NKX6-2Q9C056 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
NKX6-2Q9C056 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.53□□□□□ -2.32
NKX6-2Q9C056 AC023934.1-201ENST00000574529 2389 ntBASIC0.53□□□□□ -2.33
NKX6-2Q9C056 RNU5B-2P-201ENST00000363036 113 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 RNU4-28P-201ENST00000364739 141 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 RNU6-969P-201ENST00000383900 105 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 RNU6-440P-201ENST00000390882 105 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AF228730.1-201ENST00000397972 663 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 RNU6-1186P-201ENST00000410429 97 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 RNU6-1054P-201ENST00000411293 104 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 BX295541.1-201ENST00000417774 250 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC010095.1-201ENST00000443543 144 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 SNRPFP3-201ENST00000457792 225 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC022364.2-201ENST00000457963 554 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 SNORD11.1-201ENST00000459482 85 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 RPS29P27-201ENST00000463711 170 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 GMFBP1-201ENST00000467831 427 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC010493.1-201ENST00000513479 292 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 RNA5SP454-201ENST00000517231 127 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC106038.2-201ENST00000520706 568 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC016256.1-201ENST00000547971 354 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC022432.1-201ENST00000595739 310 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC245014.2-201ENST00000603689 287 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AC246785.4-201ENST00000605374 287 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms