Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 APOOP3-201ENST00000536787 586 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 TPRKBP2-201ENST00000565969 475 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 AC091489.2-201ENST00000566263 604 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 AC068790.6-201ENST00000602558 258 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 AC008250.2-201ENST00000615261 205 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 RNU6-545P-201ENST00000362681 104 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 SNORA33-201ENST00000363664 130 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 RNU6-533P-201ENST00000384144 107 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 RNU6-636P-201ENST00000384598 107 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AL117339.3-201ENST00000418733 162 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 ELOCP4-201ENST00000420090 333 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AC007283.2-201ENST00000424739 197 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AC091435.1-201ENST00000505442 584 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 RNA5SP255-201ENST00000516370 107 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 MIR4753-201ENST00000585119 83 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AC146944.4-201ENST00000602697 718 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AL929325.1-201ENST00000603096 117 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 AL513423.1-201ENST00000621695 132 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 SNORD3E-202ENST00000627253 216 ntBASIC0.58□□□□□ -2.32
UPF3BQ9BZI7 RNA5SP361-201ENST00000362686 118 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 RNU6-428P-201ENST00000362942 107 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 Y_RNA.576-201ENST00000384781 102 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC012306.1-201ENST00000423267 114 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 HMGN2P34-201ENST00000437647 269 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AL162395.1-201ENST00000457882 422 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC105758.1-201ENST00000506038 399 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC116562.3-201ENST00000506136 177 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC068587.5-201ENST00000528506 175 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC016256.1-201ENST00000547971 354 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 MIR5695-201ENST00000579717 85 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC091805.2-201ENST00000603848 235 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AL031667.3-201ENST00000620124 655 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 AC073544.1-201ENST00000600110 1595 ntBASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
UPF3BQ9BZI7 SNORD115-7-201ENST00000365306 82 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 SNORA50A-201ENST00000384225 134 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 RNU6-975P-201ENST00000384296 105 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 Y_RNA.480-201ENST00000384364 102 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 MIR653-201ENST00000385279 96 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AL391840.1-201ENST00000571144 367 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AL390123.1-201ENST00000603216 237 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AC104465.1-201ENST00000611365 139 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AC138749.5-201ENST00000611461 208 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AC116165.2-201ENST00000616705 206 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AC104010.1-201ENST00000616889 150 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 AL138960.2-201ENST00000625145 535 ntBASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
UPF3BQ9BZI7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 MIR208B-201ENST00000401172 77 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 RNU2-8P-201ENST00000410727 190 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 AC098869.1-201ENST00000481627 292 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 HSPE1P23-201ENST00000509838 286 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 AC007834.2-201ENST00000536310 343 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 MIR4514-201ENST00000581410 57 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 AP001836.1-201ENST00000604675 523 ntBASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
UPF3BQ9BZI7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 RNU6-969P-201ENST00000383900 105 ntBASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 RNA5SP109-201ENST00000391010 116 ntBASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AP003181.2-201ENST00000528941 181 ntBASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AC026470.2-201ENST00000561492 181 ntBASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AL353765.1-201ENST00000605514 183 ntBASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AP001596.2-201ENST00000608410 312 ntBASIC0.54□□□□□ -2.32
UPF3BQ9BZI7 AC023934.1-201ENST00000574529 2389 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 U3.8-201ENST00000363675 217 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 RNY1P12-201ENST00000364251 105 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 RNU6-505P-201ENST00000384427 107 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 MIR942-201ENST00000401111 86 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 MTATP6P16-201ENST00000434543 526 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 EXOSC3P1-201ENST00000448649 500 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 AC010486.2-201ENST00000505572 483 ntBASIC0.53□□□□□ -2.32
UPF3BQ9BZI7 AL162424.1-201ENST00000602325 221 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms