Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 ZNF658B-202ENST00000615961 3375 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-595P-201ENST00000363944 107 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 MIR487A-201ENST00000385009 80 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 MIR17-201ENST00000385012 84 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-1009P-201ENST00000390996 107 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 SNORA12.2-201ENST00000391040 156 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AL354751.2-201ENST00000415471 210 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AC096920.1-201ENST00000423991 241 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 CR769767.1-201ENST00000436337 346 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AC093027.1-201ENST00000546698 429 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AC243960.4-201ENST00000600532 288 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AL050343.2-201ENST00000607338 280 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AL590240.4-201ENST00000616908 390 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 U1.36-201ENST00000620684 176 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 MIR1291-201ENST00000627649 87 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 TPTEP1-208ENST00000636884 213 ntBASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.45□□□□□ -2.02
HERPUD2Q9BSE4 RNU4-79P-201ENST00000362764 141 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 SNORD114-6-201ENST00000364393 72 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 MIR1283-1-201ENST00000408494 87 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 MTND2P29-201ENST00000438595 412 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 RNU1-131P-201ENST00000458943 161 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 RPL30P10-201ENST00000488148 337 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 FGF7P4-201ENST00000509595 295 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-58P-201ENST00000517143 103 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 IGLV3-17-201ENST00000519099 244 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 RRN3P3-201ENST00000549207 578 ntBASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.44□□□□□ -2.02
HERPUD2Q9BSE4 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-137P-201ENST00000363680 108 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 SNORD115-8-201ENST00000363856 82 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 SNORD115-38-201ENST00000365037 82 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 SNORD81.2-201ENST00000365153 76 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.326-201ENST00000365176 113 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-245P-201ENST00000384020 107 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 SNORA67.4-201ENST00000384688 142 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 RPS15AP28-201ENST00000435088 386 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 AC114982.1-201ENST00000469402 321 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.670-201ENST00000516255 105 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 CBX3P8-201ENST00000532412 525 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 MIR4795-201ENST00000584182 89 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 AC009229.3-201ENST00000608056 282 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 MIR6840-201ENST00000611937 71 ntBASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.43□□□□□ -2.02
HERPUD2Q9BSE4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.405-201ENST00000383979 100 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.419-201ENST00000384041 102 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.451-201ENST00000384200 100 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-17P-201ENST00000384245 107 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-18P-201ENST00000384527 107 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.524-201ENST00000384564 100 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.561-201ENST00000384694 100 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 RNA5SP508-201ENST00000411327 119 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 AC074290.1-201ENST00000448883 135 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.635-201ENST00000459041 101 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 SNORA25.14-201ENST00000516481 132 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-307P-201ENST00000516743 106 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.706-201ENST00000516933 99 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 AC104581.2-201ENST00000572227 430 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 AL132765.2-201ENST00000610812 351 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.42□□□□□ -2.02
HERPUD2Q9BSE4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.138-201ENST00000363462 102 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 RNU5F-3P-201ENST00000363767 117 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-280P-201ENST00000364145 104 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 RNA5SP126-201ENST00000365092 109 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-1227P-201ENST00000383981 107 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 AL158823.1-201ENST00000418441 478 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 RPL23AP50-201ENST00000434149 455 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-277P-201ENST00000516272 106 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.691-201ENST00000516611 103 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 MIR3169-201ENST00000578032 83 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 AC005899.2-201ENST00000584353 90 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 AC100812.1-201ENST00000607622 580 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.41□□□□□ -2.02
HERPUD2Q9BSE4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms