Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 RNU7-110P-201ENST00000516891 62 ntBASIC3.36□□□□□ -1.87
PTPN18Q99952 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN18Q99952 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN18Q99952 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
PTPN18Q99952 MIR3144-201ENST00000579460 79 ntBASIC3.36□□□□□ -1.87
PTPN18Q99952 AC008749.1-201ENST00000597650 306 ntBASIC3.36□□□□□ -1.87
PTPN18Q99952 AC004832.4-201ENST00000608952 331 ntBASIC3.36□□□□□ -1.87
PTPN18Q99952 AC108706.1-201ENST00000611053 297 ntBASIC3.36□□□□□ -1.87
PTPN18Q99952 AC073349.3-201ENST00000617616 186 ntBASIC3.36□□□□□ -1.87
PTPN18Q99952 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN18Q99952 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN18Q99952 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PTPN18Q99952 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTPN18Q99952 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTPN18Q99952 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTPN18Q99952 Y_RNA.319-201ENST00000365138 92 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 Y_RNA.383-201ENST00000383855 97 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 RNU6-1081P-201ENST00000384537 107 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 AC023141.4-201ENST00000412031 328 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN18Q99952 PTGES3P4-201ENST00000426243 356 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 AL358075.3-201ENST00000426289 226 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 RN7SL330P-201ENST00000469709 307 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 AC091959.1-201ENST00000495857 238 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 AC091874.1-201ENST00000511402 339 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 Y_RNA.679-201ENST00000516416 91 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 RNU6-58P-201ENST00000517143 103 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN18Q99952 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN18Q99952 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN18Q99952 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPN18Q99952 AL138963.2-201ENST00000605137 226 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 MIR7843-201ENST00000622274 79 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 MIR3529-201ENST00000637713 78 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTPN18Q99952 AC010680.1-201ENST00000590024 3590 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTPN18Q99952 AC010889.1-201ENST00000566193 2666 ntBASIC3.35□□□□□ -1.87
PTPN18Q99952 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.35□□□□□ -1.87
PTPN18Q99952 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.87
PTPN18Q99952 RNA5SP139-201ENST00000364340 117 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 CD24P4-201ENST00000382840 243 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 RNU6-1027P-201ENST00000383998 107 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 RNU6-20P-201ENST00000384106 107 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 Y_RNA.441-201ENST00000384123 112 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 RNU6-514P-201ENST00000384208 107 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 RN7SKP51-201ENST00000410781 304 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 ARF4P2-201ENST00000430209 526 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 RPS3P1-201ENST00000456781 192 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN18Q99952 AP001485.1-201ENST00000604799 199 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 HAUS6P2-201ENST00000433254 2404 ntBASIC3.34□□□□□ -1.87
PTPN18Q99952 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PTPN18Q99952 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PTPN18Q99952 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PTPN18Q99952 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN18Q99952 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPN18Q99952 AP003122.5-201ENST00000527668 3766 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
PTPN18Q99952 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN18Q99952 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN18Q99952 RNU6-799P-201ENST00000363567 107 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 RNU6-961P-201ENST00000363893 105 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN18Q99952 Y_RNA.418-201ENST00000384029 102 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 RNU6-1289P-201ENST00000384431 106 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 RNU6-541P-201ENST00000384709 110 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 RN7SKP61-201ENST00000410642 295 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPN18Q99952 RPL23AP36-201ENST00000413895 458 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 AC096649.2-201ENST00000416186 393 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 AC074117.2-201ENST00000417130 397 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN18Q99952 WARS2P1-201ENST00000429678 537 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 SNRPGP7-201ENST00000469016 106 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 AP001025.1-201ENST00000486139 332 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN18Q99952 SNORD19.2-201ENST00000516978 73 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 AP005660.1-201ENST00000522972 293 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN18Q99952 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
PTPN18Q99952 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN18Q99952 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PTPN18Q99952 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN18Q99952 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN18Q99952 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN18Q99952 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN18Q99952 Y_RNA.8-201ENST00000362353 102 ntBASIC3.32□□□□□ -1.88
PTPN18Q99952 RNA5SP68-201ENST00000363885 119 ntBASIC3.32□□□□□ -1.88
PTPN18Q99952 Y_RNA.217-201ENST00000364214 105 ntBASIC3.32□□□□□ -1.88
PTPN18Q99952 RNU6-1141P-201ENST00000364520 107 ntBASIC3.32□□□□□ -1.88
PTPN18Q99952 RNU6-1175P-201ENST00000365200 107 ntBASIC3.32□□□□□ -1.88
PTPN18Q99952 RNU6-750P-201ENST00000390946 107 ntBASIC3.32□□□□□ -1.88
PTPN18Q99952 Z98941.1-201ENST00000407764 100 ntBASIC3.32□□□□□ -1.88
PTPN18Q99952 RNU6-1135P-201ENST00000411083 103 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms