Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
ABCA3Q99758 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.51□□□□□ -2.49
ABCA3Q99758 AF235103.2-201ENST00000525753 346 ntBASIC-0.51□□□□□ -2.49
ABCA3Q99758 AC007014.2-201ENST00000615581 479 ntBASIC-0.51□□□□□ -2.49
ABCA3Q99758 SNORD56.1-201ENST00000362913 68 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU6-353P-201ENST00000364266 108 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU6-395P-201ENST00000365662 106 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 MIR145-201ENST00000384967 88 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.52□□□□□ -2.49
ABCA3Q99758 AL139396.1-201ENST00000421137 167 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AC113347.3-201ENST00000509113 148 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AC023827.1-201ENST00000569247 97 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.52□□□□□ -2.49
ABCA3Q99758 AL390123.1-201ENST00000603216 237 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RPL17P51-201ENST00000605218 238 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 uc_338.36-201ENST00000622331 158 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AL157770.1-201ENST00000623049 439 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 MIR412-201ENST00000362142 91 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU6-417P-201ENST00000384712 107 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU6-440P-201ENST00000390882 105 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU4-22P-201ENST00000411058 166 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 MTND2P20-201ENST00000440805 661 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AC114811.1-201ENST00000507207 168 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU1-142P-201ENST00000516682 145 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 MIR4743-201ENST00000584576 69 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AC112187.2-201ENST00000604345 283 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 AC004832.4-201ENST00000608952 331 ntBASIC-0.52□□□□□ -2.49
ABCA3Q99758 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.52□□□□□ -2.49
ABCA3Q99758 MIR1-1-201ENST00000362147 71 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 SNORD114-5-201ENST00000362928 70 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 SNORA2.2-201ENST00000365473 135 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 RNU6-549P-201ENST00000384433 107 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 RNU6-679P-201ENST00000391003 106 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 MIR892B-201ENST00000401279 77 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 SNORD71-201ENST00000411292 86 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 ZNF886P-201ENST00000450781 723 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 RPL18AP17-201ENST00000455326 198 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.53□□□□□ -2.49
ABCA3Q99758 RNU2-12P-201ENST00000517216 168 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.53□□□□□ -2.49
ABCA3Q99758 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.53□□□□□ -2.49
ABCA3Q99758 AL391903.3-201ENST00000612158 163 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 SCARNA4-202ENST00000625402 129 ntBASIC-0.53□□□□□ -2.49
ABCA3Q99758 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 SNORA18.1-201ENST00000363418 128 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 AL590623.1-201ENST00000427864 105 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 AL606517.2-201ENST00000442855 241 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.54□□□□□ -2.5
ABCA3Q99758 RNU6-856P-201ENST00000516959 98 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 SNORA59B-202ENST00000578183 701 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 AC087685.1-201ENST00000587507 141 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.54□□□□□ -2.5
ABCA3Q99758 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 SNORA32.2-201ENST00000384049 122 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 MTATP6P16-201ENST00000434543 526 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.55□□□□□ -2.5
ABCA3Q99758 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.55□□□□□ -2.5
ABCA3Q99758 AL138889.2-201ENST00000603883 242 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.55□□□□□ -2.5
ABCA3Q99758 RNU6-343P-201ENST00000364709 104 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 MIR593-201ENST00000384856 100 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 MIR660-201ENST00000385235 97 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
ABCA3Q99758 RNA5SP201-201ENST00000410316 124 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 AC007969.2-201ENST00000441891 191 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 AC006026.2-201ENST00000457376 180 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 SNORD4A-201ENST00000459174 72 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 SNORA43.2-201ENST00000516652 128 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 AC023157.2-201ENST00000540596 141 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 TMF1P1-201ENST00000576058 373 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 MIR4293-201ENST00000584305 78 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 AC091135.1-201ENST00000585943 307 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 AL034555.1-201ENST00000604816 211 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 PART1_2.1-201ENST00000612397 250 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 MTND5P42-201ENST00000637720 498 ntBASIC-0.55□□□□□ -2.5
ABCA3Q99758 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.56□□□□□ -2.5
ABCA3Q99758 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.56□□□□□ -2.5
ABCA3Q99758 SUMO2P5-201ENST00000506790 245 ntBASIC-0.56□□□□□ -2.5
ABCA3Q99758 MTCO3P9-201ENST00000506989 781 ntBASIC-0.56□□□□□ -2.5
ABCA3Q99758 AC092447.9-201ENST00000603395 144 ntBASIC-0.56□□□□□ -2.5
ABCA3Q99758 AL359075.3-201ENST00000613288 217 ntBASIC-0.56□□□□□ -2.5
ABCA3Q99758 AC015726.2-201ENST00000620112 122 ntBASIC-0.56□□□□□ -2.5
ABCA3Q99758 MIR6079-201ENST00000635807 62 ntBASIC-0.56□□□□□ -2.5
ABCA3Q99758 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.57□□□□□ -2.5
ABCA3Q99758 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 SNORD14C-201ENST00000365382 88 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 MTCO2P8-201ENST00000412213 658 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.57□□□□□ -2.5
ABCA3Q99758 AL354692.1-201ENST00000423044 315 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.57□□□□□ -2.5
ABCA3Q99758 OR8K2P-201ENST00000524645 927 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.57□□□□□ -2.5
ABCA3Q99758 MIR3923-201ENST00000579521 83 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 MTND3P19-201ENST00000603825 345 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms