Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.3□□□□□ -2.36
ALPK3Q96L96 ELOCP4-201ENST00000420090 333 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AC007283.2-201ENST00000424739 197 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.3□□□□□ -2.36
ALPK3Q96L96 MTND1P32-201ENST00000433043 938 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 MTND3P1-201ENST00000441336 220 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AL606517.2-201ENST00000442855 241 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AL031313.1-201ENST00000448435 256 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 MTND1P12-201ENST00000455231 147 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AC024995.1-201ENST00000523014 93 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.3□□□□□ -2.36
ALPK3Q96L96 AP003168.1-201ENST00000530091 307 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.3□□□□□ -2.36
ALPK3Q96L96 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.3□□□□□ -2.36
ALPK3Q96L96 AC025627.3-201ENST00000582078 182 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 MIR5006-201ENST00000583027 110 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AL929325.1-201ENST00000603096 117 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 FAM157A-202ENST00000615155 405 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
ALPK3Q96L96 MTND4P14-201ENST00000435799 1354 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 RNA5SP361-201ENST00000362686 118 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 RNU5E-10P-201ENST00000363506 118 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 SNORD18A-201ENST00000363753 72 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 U3.9-201ENST00000363823 204 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 SNORA26.3-201ENST00000391119 136 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 MTND3P17-201ENST00000416968 344 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 AC092423.1-201ENST00000430165 186 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 AC113410.1-201ENST00000505029 247 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 AC010486.2-201ENST00000505572 483 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 HMGB1P29-201ENST00000505659 499 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 MTND2P31-201ENST00000512602 616 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 RNU6-856P-201ENST00000516959 98 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 AC105185.1-201ENST00000518705 535 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 AC064807.4-201ENST00000607201 407 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 AC006386.1-201ENST00000619436 415 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 AC011155.2-201ENST00000623202 216 ntBASIC0.29□□□□□ -2.36
ALPK3Q96L96 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
ALPK3Q96L96 RNU6-1200P-201ENST00000384162 107 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 SNORA80D-201ENST00000384488 135 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 RNU6-906P-201ENST00000384700 70 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 MIR1-2-201ENST00000384961 85 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AL354692.1-201ENST00000423044 315 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 SRRM1P2-201ENST00000464531 1192 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AL049829.1-201ENST00000465411 156 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC079140.5-201ENST00000507882 310 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 RNU6-948P-201ENST00000516374 107 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AP002001.1-203ENST00000534002 267 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.28□□□□□ -2.36
ALPK3Q96L96 TPRKBP2-201ENST00000565969 475 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 BCRP9-201ENST00000605312 388 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC040896.1-201ENST00000613819 479 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AP000484.1-201ENST00000620067 1252 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 BX322639.1-202ENST00000423987 2213 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 RNU6-433P-201ENST00000363216 104 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 RNU6-641P-201ENST00000384006 107 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 MIR300-201ENST00000401138 83 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 LINC01399-202ENST00000458450 244 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC104982.1-201ENST00000478775 574 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC008628.2-201ENST00000502605 298 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC109479.2-201ENST00000517842 174 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC022878.1-201ENST00000530684 149 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
ALPK3Q96L96 MIR4667-201ENST00000578933 66 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC104465.1-201ENST00000611365 139 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 AC027807.2-201ENST00000616099 408 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.28□□□□□ -2.36
ALPK3Q96L96 SNORA32.2-201ENST00000384049 122 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 MIR329-1-201ENST00000385028 80 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 CDK8P2-201ENST00000415020 547 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 Z95118.1-201ENST00000421372 247 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.27□□□□□ -2.37
ALPK3Q96L96 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.27□□□□□ -2.37
ALPK3Q96L96 RNU7-34P-201ENST00000459394 64 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 MTCO2P29-201ENST00000465212 189 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AC010587.1-201ENST00000505809 469 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AC090049.2-201ENST00000550377 109 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AC091489.2-201ENST00000566263 604 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.27□□□□□ -2.37
ALPK3Q96L96 AC093913.1-201ENST00000614178 329 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AL357075.2-201ENST00000614906 189 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AL136221.1-201ENST00000621449 509 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 AC097372.5-201ENST00000623665 376 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 CASC19-280ENST00000642102 1351 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.27□□□□□ -2.37
ALPK3Q96L96 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.27□□□□□ -2.37
ALPK3Q96L96 RNY1P12-201ENST00000364251 105 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 RNU6-793P-201ENST00000384233 104 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 Y_RNA.576-201ENST00000384781 102 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ALPK3Q96L96 MIR1253-201ENST00000408273 105 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 AL590135.1-201ENST00000422215 156 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 AC019205.3-201ENST00000424573 156 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 AL606662.1-201ENST00000445763 553 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 AC016700.2-201ENST00000446011 156 ntBASIC0.26□□□□□ -2.37
ALPK3Q96L96 EXOSC3P1-201ENST00000448649 500 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms