Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC091435.1-201ENST00000505442 584 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AC091133.4-201ENST00000511142 308 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 RNU2-34P-201ENST00000516534 121 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 RNA5SP481-201ENST00000516814 122 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AC026470.2-201ENST00000561492 181 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AC073413.2-201ENST00000604332 360 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AL022345.2-201ENST00000606307 135 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 MIR3976-201ENST00000606807 139 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AC017083.3-201ENST00000609955 700 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AL353149.1-201ENST00000610667 244 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AC005562.2-201ENST00000618264 111 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AL359757.2-201ENST00000624309 274 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AC100821.1-201ENST00000523153 2479 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 Y_RNA.553-201ENST00000384670 102 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 MIR548B-201ENST00000385247 97 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 MTND3P9-201ENST00000429526 346 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 MTCO3P29-201ENST00000432119 779 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 MTCO1P19-201ENST00000443487 500 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 U8.21-201ENST00000459536 136 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AC011406.1-201ENST00000512440 370 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 RNA5SP384-201ENST00000516615 116 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 SCOCP1-201ENST00000554676 349 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AL118558.2-201ENST00000556294 238 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AC023043.2-201ENST00000589678 1026 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AC119751.7-201ENST00000600494 245 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AC092747.3-201ENST00000603769 301 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AP001330.5-201ENST00000607176 411 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 AL359697.1-201ENST00000624879 587 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 BX322639.1-202ENST00000423987 2213 ntBASIC1.2□□□□□ -2.22
PKNOX2Q96KN3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 RNU6-38P-201ENST00000384085 107 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 SNORD37.1-201ENST00000390968 65 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 Y_RNA.582-201ENST00000391023 95 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 MRPL35P1-201ENST00000404272 572 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 RNU4-55P-201ENST00000410731 137 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 RNU2-64P-201ENST00000411315 191 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC069257.2-201ENST00000441819 155 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 snoU13.23-201ENST00000458863 104 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 TRBVA-201ENST00000498804 316 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 RNU6-1038P-201ENST00000516516 104 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 RNU1-92P-201ENST00000517017 135 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC104576.1-201ENST00000524225 88 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC025423.5-201ENST00000550230 219 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 MIR4524B-201ENST00000581569 115 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 MIR4753-201ENST00000585119 83 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 MIR5692C1-201ENST00000585309 91 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC016727.2-201ENST00000603988 621 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC126177.8-201ENST00000618339 1015 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC009509.4-201ENST00000619202 509 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 AC095038.3-201ENST00000634439 195 ntBASIC1.19□□□□□ -2.22
PKNOX2Q96KN3 ELL2P3-201ENST00000457883 1602 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 ZNF209P-201ENST00000593450 2304 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 Y_RNA.77-201ENST00000362962 107 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 RNA5SP494-201ENST00000410653 129 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AL663109.1-201ENST00000411498 844 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AL161935.2-201ENST00000414627 60 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 CDK8P2-201ENST00000415020 547 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AC004386.2-201ENST00000441858 148 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AC083798.1-201ENST00000472671 131 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 RNA5SP401-201ENST00000515920 127 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AC104383.1-201ENST00000530297 370 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 MIR3124-201ENST00000582636 67 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 MIR5006-201ENST00000583027 110 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 BX284668.6-201ENST00000606899 438 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AL357078.3-201ENST00000607528 618 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 AC104458.1-201ENST00000608243 463 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 MIR3974-201ENST00000637126 96 ntBASIC1.18□□□□□ -2.22
PKNOX2Q96KN3 RNU4-66P-201ENST00000365199 138 ntBASIC1.17□□□□□ -2.22
PKNOX2Q96KN3 RNY3P9-201ENST00000384727 106 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms