Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 Z99129.1-201ENST00000612510 255 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 AC121333.1-201ENST00000567488 2709 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 MTND4P5-201ENST00000435821 1374 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
VMP1Q96GC9 Y_RNA.167-201ENST00000363735 109 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 SNORD1A-201ENST00000364968 72 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 RNU6-784P-201ENST00000384330 106 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 MIR548B-201ENST00000385247 97 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.67□□□□□ -2.14
VMP1Q96GC9 SNRPEP10-201ENST00000420249 274 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 USP9YP14-201ENST00000430663 563 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 AC016717.1-201ENST00000448918 286 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 RNU6-902P-201ENST00000517212 91 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 MTND1P35-201ENST00000526739 508 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.67□□□□□ -2.14
VMP1Q96GC9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.67□□□□□ -2.14
VMP1Q96GC9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.67□□□□□ -2.14
VMP1Q96GC9 AC004492.1-201ENST00000607036 742 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VMP1Q96GC9 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 MIR338-201ENST00000636369 67 ntBASIC1.67□□□□□ -2.14
VMP1Q96GC9 Y_RNA.231-201ENST00000364358 102 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 MIR549A-201ENST00000385268 96 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.66□□□□□ -2.14
VMP1Q96GC9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.66□□□□□ -2.14
VMP1Q96GC9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.66□□□□□ -2.14
VMP1Q96GC9 AC107401.1-201ENST00000503426 685 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 AC108210.2-201ENST00000503681 201 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.66□□□□□ -2.14
VMP1Q96GC9 RNU6-1146P-201ENST00000516282 102 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 Y_RNA.693-201ENST00000516641 110 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VMP1Q96GC9 AL512360.1-201ENST00000555346 234 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 MIR4524B-201ENST00000581569 115 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 AL359880.1-201ENST00000621879 266 ntBASIC1.66□□□□□ -2.14
VMP1Q96GC9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
VMP1Q96GC9 SNORD33-201ENST00000362761 85 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 RNU6-1305P-201ENST00000364353 104 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
VMP1Q96GC9 MIR764-201ENST00000390811 85 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.65□□□□□ -2.15
VMP1Q96GC9 AC083904.1-201ENST00000487828 231 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 AF186996.7-201ENST00000492781 209 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 AC079140.2-201ENST00000506193 142 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.65□□□□□ -2.15
VMP1Q96GC9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.65□□□□□ -2.15
VMP1Q96GC9 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 PRR13P7-201ENST00000605538 430 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 RNU6-89P-201ENST00000606519 100 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 AL359757.2-201ENST00000624309 274 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 AC095038.3-201ENST00000634439 195 ntBASIC1.65□□□□□ -2.15
VMP1Q96GC9 MTND5P10-201ENST00000603719 1809 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 SNORA72.2-201ENST00000365028 127 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 CALM2P3-201ENST00000400429 449 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 RNU6-955P-201ENST00000410497 104 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 RNU2-16P-201ENST00000410712 136 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 ERLEC1P1-201ENST00000433806 578 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 AC073910.1-201ENST00000445047 438 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.64□□□□□ -2.15
VMP1Q96GC9 snoU13.27-201ENST00000459278 104 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.64□□□□□ -2.15
VMP1Q96GC9 AC093534.1-201ENST00000504977 132 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.64□□□□□ -2.15
VMP1Q96GC9 AC015712.3-201ENST00000559380 164 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 AC146944.4-201ENST00000602697 718 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 FAM157A-202ENST00000615155 405 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 AC048344.4-201ENST00000619744 527 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 AL121890.5-201ENST00000620848 304 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.64□□□□□ -2.15
VMP1Q96GC9 OR4G1P-203ENST00000641984 1631 ntBASIC1.64□□□□□ -2.15
VMP1Q96GC9 MIR302D-201ENST00000362275 68 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 RNU6-522P-201ENST00000364497 107 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 RNU6-128P-201ENST00000383976 107 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 MIR586-201ENST00000385035 97 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 RNU6-1068P-201ENST00000410958 103 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 COX6CP10-201ENST00000416832 224 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 SEPT14P3-201ENST00000439401 183 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 AL732372.2-207ENST00000445840 183 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 MTATP6P26-201ENST00000445926 662 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 SEPT14P2-201ENST00000453405 183 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.63□□□□□ -2.15
VMP1Q96GC9 RPL23AP75-201ENST00000491601 451 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.63□□□□□ -2.15
VMP1Q96GC9 SEPT14P4-201ENST00000513445 186 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.63□□□□□ -2.15
VMP1Q96GC9 FO082796.1-201ENST00000523795 183 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 AC024909.2-201ENST00000553035 286 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.63□□□□□ -2.15
VMP1Q96GC9 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
VMP1Q96GC9 snoU2-30.2-201ENST00000362805 70 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 RNU6-254P-201ENST00000363377 107 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 MIR515-2-201ENST00000384883 83 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 MIR515-1-201ENST00000384884 83 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 AC004866.1-201ENST00000411748 78 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms