Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC005786.1-201ENST00000588553 154 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 AC093913.1-201ENST00000614178 329 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 KPNA2P1-201ENST00000458289 1591 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 SNORD116-11-201ENST00000383882 92 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 NCOR1P3-201ENST00000420479 303 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 MTND1P2-201ENST00000430604 821 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC007395.1-201ENST00000451333 677 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC130509.1-201ENST00000464158 433 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC087477.1-201ENST00000465747 340 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 RNU6-273P-201ENST00000516937 96 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 SUMO2P18-201ENST00000518873 252 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 MIR3169-201ENST00000578032 83 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 MIR4753-201ENST00000585119 83 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC019193.3-201ENST00000609144 554 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 AC009248.2-201ENST00000619826 254 ntBASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.82□□□□□ -2.12
SNRNP40Q96DI7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 Y_RNA.72-201ENST00000362894 103 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 Y_RNA.301-201ENST00000364990 103 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 RNU6-784P-201ENST00000384330 106 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 MIR300-201ENST00000401138 83 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 FGF7P8-201ENST00000402994 292 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AL033519.2-201ENST00000403958 392 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AL356776.1-201ENST00000406574 447 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 MTND1P23-201ENST00000416931 372 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 MTCO3P46-201ENST00000425787 232 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AC004386.2-201ENST00000441858 148 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 MTND1P17-201ENST00000448961 204 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 MTCO2P30-201ENST00000503662 364 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 RNU4-49P-201ENST00000516080 140 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 RNU6-1088P-201ENST00000516850 104 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AP005639.2-201ENST00000527592 928 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 GNAI2P1-201ENST00000541815 315 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AC016727.2-201ENST00000603988 621 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 SNRPGP20-201ENST00000604477 205 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 AC083806.3-201ENST00000614016 455 ntBASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SNRNP40Q96DI7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 RNU6-545P-201ENST00000362681 104 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 RNU6-1013P-201ENST00000384180 107 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 MIR517A-201ENST00000385001 87 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 RPS26P42-201ENST00000413485 326 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 WARS2P1-201ENST00000429678 537 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 MTND4LP16-201ENST00000440828 295 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 RBMX2P4-201ENST00000441256 376 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 DAP3P1-201ENST00000441522 278 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 OR2AQ1P-201ENST00000451972 200 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 AC016925.1-201ENST00000458303 298 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 RNU6-329P-201ENST00000459618 107 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 AC097473.1-201ENST00000508142 408 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 RNVU1-2-201ENST00000516326 135 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 MIR4781-201ENST00000585250 76 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 TCL6_2.1-201ENST00000615162 119 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 AL159152.1-201ENST00000635019 2587 ntBASIC1.8□□□□□ -2.12
SNRNP40Q96DI7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 SNORA12.2-201ENST00000391040 156 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 SNORA17.3-201ENST00000391159 129 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 RNU6-510P-201ENST00000391239 108 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AC074290.1-201ENST00000448883 135 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AC114982.1-201ENST00000469402 321 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AC104435.1-201ENST00000483483 166 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AC079804.2-201ENST00000490376 200 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AF186996.7-201ENST00000492781 209 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AC018710.1-201ENST00000506509 158 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 RNA5SP454-201ENST00000517231 127 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 MIR4742-201ENST00000581069 85 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 7SK.7-201ENST00000603504 247 ntBASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.79□□□□□ -2.12
SNRNP40Q96DI7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms