Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 OR9P1P-201ENST00000496431 281 ntBASIC4.33□□□□□ -1.72
HLA-CQ95604 AC025647.1-201ENST00000517879 253 ntBASIC4.33□□□□□ -1.72
HLA-CQ95604 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-CQ95604 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-CQ95604 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-CQ95604 MIR7975-201ENST00000619350 68 ntBASIC4.33□□□□□ -1.72
HLA-CQ95604 Z82217.1-201ENST00000625157 8149 ntBASIC4.33□□□□□ -1.72
HLA-CQ95604 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-CQ95604 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-CQ95604 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-CQ95604 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HLA-CQ95604 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-CQ95604 RNU6-234P-201ENST00000365229 104 ntBASIC4.32□□□□□ -1.72
HLA-CQ95604 RNA5SP136-201ENST00000410906 107 ntBASIC4.32□□□□□ -1.72
HLA-CQ95604 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-CQ95604 AL021397.1-201ENST00000451806 248 ntBASIC4.32□□□□□ -1.72
HLA-CQ95604 AC008155.2-201ENST00000464337 397 ntBASIC4.32□□□□□ -1.72
HLA-CQ95604 AC109329.2-201ENST00000519658 482 ntBASIC4.32□□□□□ -1.72
HLA-CQ95604 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-CQ95604 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-CQ95604 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-CQ95604 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-CQ95604 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-CQ95604 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-CQ95604 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-CQ95604 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-CQ95604 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-CQ95604 SNORA60-201ENST00000362396 134 ntBASIC4.31□□□□□ -1.72
HLA-CQ95604 SNORD14D-201ENST00000384390 87 ntBASIC4.31□□□□□ -1.72
HLA-CQ95604 HMGN2P8-201ENST00000391458 268 ntBASIC4.31□□□□□ -1.72
HLA-CQ95604 RNU6-63P-201ENST00000516690 95 ntBASIC4.31□□□□□ -1.72
HLA-CQ95604 SNORA31.21-201ENST00000517180 77 ntBASIC4.31□□□□□ -1.72
HLA-CQ95604 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-CQ95604 AL929325.1-201ENST00000603096 117 ntBASIC4.31□□□□□ -1.72
HLA-CQ95604 AL160290.3-201ENST00000604869 165 ntBASIC4.31□□□□□ -1.72
HLA-CQ95604 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-CQ95604 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-CQ95604 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-CQ95604 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
HLA-CQ95604 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-CQ95604 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-CQ95604 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-CQ95604 RNA5SP354-201ENST00000391247 136 ntBASIC4.3□□□□□ -1.72
HLA-CQ95604 RNU2-37P-201ENST00000410695 177 ntBASIC4.3□□□□□ -1.72
HLA-CQ95604 RPL30P4-201ENST00000429309 333 ntBASIC4.3□□□□□ -1.72
HLA-CQ95604 RNU6-365P-201ENST00000517113 106 ntBASIC4.3□□□□□ -1.72
HLA-CQ95604 AC006064.5-201ENST00000541782 248 ntBASIC4.3□□□□□ -1.72
HLA-CQ95604 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-CQ95604 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-CQ95604 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
HLA-CQ95604 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-CQ95604 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-CQ95604 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-CQ95604 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-CQ95604 MAPK10-372ENST00000641954 3413 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-CQ95604 RNU6-766P-201ENST00000362478 107 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 Y_RNA.796-201ENST00000364268 102 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 Y_RNA.799-201ENST00000364992 102 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 RNU6-1240P-201ENST00000365155 104 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 RNU6-1292P-201ENST00000383856 107 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 AL031121.1-201ENST00000406553 254 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 RNY4P30-201ENST00000410216 95 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 SNORA74C-2-201ENST00000411179 201 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-CQ95604 CYCSP35-201ENST00000451978 304 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-CQ95604 ATP5EP1-201ENST00000510257 156 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 RNU7-149P-201ENST00000516739 59 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-CQ95604 MIR6868-201ENST00000611215 58 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 Pinc.1-201ENST00000616452 154 ntBASIC4.29□□□□□ -1.72
HLA-CQ95604 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-CQ95604 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-CQ95604 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-CQ95604 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-CQ95604 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-CQ95604 RNU6-1107P-201ENST00000364817 104 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 SNORA3.3-201ENST00000408712 125 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 AC104333.2-201ENST00000422630 192 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 NDUFB1P1-201ENST00000435191 180 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 AC018634.1-201ENST00000437554 401 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 AC006011.1-201ENST00000442758 349 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-CQ95604 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-CQ95604 RNA5SP112-201ENST00000515937 99 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.28□□□□□ -1.72
HLA-CQ95604 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-CQ95604 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-CQ95604 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-CQ95604 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-CQ95604 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-CQ95604 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-CQ95604 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-CQ95604 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-CQ95604 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-CQ95604 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-CQ95604 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-CQ95604 Y_RNA.66-201ENST00000362862 102 ntBASIC4.27□□□□□ -1.73
HLA-CQ95604 MIR570-201ENST00000384917 97 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms