Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 Y_RNA.252-201ENST00000364556 101 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 RNU6-99P-201ENST00000364721 107 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 Y_RNA.319-201ENST00000365138 92 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 SNORA51.11-201ENST00000384442 131 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 RNU6-1093P-201ENST00000391194 107 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 MIR190B-201ENST00000401119 79 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 AC018865.2-201ENST00000423631 129 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 RNU6-120P-201ENST00000516077 103 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 AC026470.2-201ENST00000561492 181 ntBASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.23□□□□□ -2.05
SLC44A1Q8WWI5 BX322639.1-202ENST00000423987 2213 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AL596028.1-201ENST00000326971 197 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 Y_RNA.5-201ENST00000362334 102 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 Y_RNA.394-201ENST00000383942 103 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 RNU1-139P-201ENST00000391307 165 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 RNU6-1156P-201ENST00000410365 100 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 RN7SKP284-201ENST00000411002 343 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AL137792.2-201ENST00000443484 235 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 TRBV12-1-201ENST00000479785 344 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AC132942.1-201ENST00000486753 483 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 RN7SL636P-201ENST00000497504 294 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 Y_RNA.701-201ENST00000516812 110 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 RNU7-4P-201ENST00000516961 62 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 RNU6-699P-201ENST00000517081 110 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 RNU6-58P-201ENST00000517143 103 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 AL355297.2-201ENST00000604792 129 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 CTSLP2-204ENST00000629029 392 ntBASIC2.22□□□□□ -2.05
SLC44A1Q8WWI5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-874P-201ENST00000362390 105 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 RNU1-23P-201ENST00000363361 144 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 RNU1-115P-201ENST00000365329 160 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.364-201ENST00000365532 101 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 MIR625-201ENST00000385047 85 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 MIR561-201ENST00000385216 97 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 SNORA12-201ENST00000391162 147 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 MRPS18CP6-201ENST00000423587 223 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 TOMM22P6-201ENST00000465035 409 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 AC044792.1-201ENST00000593294 196 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 AC016727.2-201ENST00000603988 621 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 AL590808.1-201ENST00000618696 141 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 uc_338.22-201ENST00000622722 187 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 AC134503.1-201ENST00000633048 54 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SLC44A1Q8WWI5 MIR369-201ENST00000362155 70 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-245P-201ENST00000384020 107 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.428-201ENST00000384078 102 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-159P-201ENST00000391080 106 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AL355497.1-201ENST00000406262 551 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 MIR1294-201ENST00000408503 142 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AL354751.2-201ENST00000415471 210 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AC092423.1-201ENST00000430165 186 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AL035666.1-201ENST00000446195 348 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 ANXA2P1-201ENST00000505539 926 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 SNORD116.3-201ENST00000517176 78 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AC022616.8-201ENST00000533569 253 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 SNRPGP18-201ENST00000553000 214 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 MIR3945-201ENST00000581853 98 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 SNRPGP20-201ENST00000604477 205 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 SNORD14A-201ENST00000606526 91 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AC087588.2-201ENST00000617667 426 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 AC022140.2-201ENST00000623500 188 ntBASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLC44A1Q8WWI5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNU1-76P-201ENST00000362903 159 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.106-201ENST00000363189 100 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.128-201ENST00000363391 112 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNU5F-3P-201ENST00000363767 117 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-694P-201ENST00000364071 147 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-26P-201ENST00000383985 107 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-546P-201ENST00000383991 107 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.496-201ENST00000384444 101 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNA5SP213-201ENST00000391031 106 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR320B2-201ENST00000408479 138 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms