Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC103975.1-201ENST00000482506 483 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 SNORA25.14-201ENST00000516481 132 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 AC022080.3-201ENST00000544433 482 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 AC027176.1-201ENST00000560204 514 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 AC023824.2-201ENST00000566185 400 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 RPL30P11-203ENST00000598995 310 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 SNRPGP20-201ENST00000604477 205 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 AC062037.2-201ENST00000610137 73 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.98□□□□□ -1.93
CCHCR1Q8TD31 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 AC096644.4-201ENST00000563417 2912 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 Y_RNA.143-201ENST00000363520 106 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 MIR181A2-201ENST00000384863 110 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 MIR549A-201ENST00000385268 96 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 SNORA46.1-201ENST00000391069 153 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 MIR320B2-201ENST00000408479 138 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 RNU2-25P-201ENST00000411041 191 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 RPL21P38-201ENST00000418090 167 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 AC010095.1-201ENST00000443543 144 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 AC083906.5-201ENST00000503722 328 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 SNORA74D-201ENST00000516404 141 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 CYCSP23-201ENST00000519781 313 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 AC026470.2-201ENST00000561492 181 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 MIR4300-201ENST00000581016 96 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.97□□□□□ -1.93
CCHCR1Q8TD31 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
CCHCR1Q8TD31 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
CCHCR1Q8TD31 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 MIR26A1-201ENST00000362205 77 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 snoU2_19.1-201ENST00000362361 80 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 RNU1-62P-201ENST00000362599 164 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 RNU1-72P-201ENST00000362976 153 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 RNU6-926P-201ENST00000384075 107 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 SNORD63-201ENST00000384262 68 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.483-201ENST00000384380 101 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 S100A11P2-201ENST00000467589 312 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 AC098869.1-201ENST00000481627 292 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 SCGB1D5P-201ENST00000515134 247 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.683-201ENST00000516508 93 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 AC023157.2-201ENST00000540596 141 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 AC110588.1-201ENST00000559699 137 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 MIR376A1-201ENST00000616574 68 ntBASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCHCR1Q8TD31 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.179-201ENST00000363844 90 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.288-201ENST00000364854 92 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.462-201ENST00000384268 102 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.595-201ENST00000410403 105 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 SNORA40.9-201ENST00000515895 93 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 RPPH1-2P-201ENST00000516688 293 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 MIR3200-201ENST00000580767 85 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 MIR4423-201ENST00000580922 80 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 MZT1P2-201ENST00000604387 248 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 AL357075.2-201ENST00000614906 189 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 MIR7515-201ENST00000637837 67 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 U6.104-201ENST00000637979 90 ntBASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCHCR1Q8TD31 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 MTND5P35-201ENST00000557537 1720 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 snoU2_19.2-201ENST00000363024 80 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.188-201ENST00000363952 111 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 SNORA18.3-201ENST00000384122 132 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 RNU6-793P-201ENST00000384233 104 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 RNU6-937P-201ENST00000384325 106 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 MIR128-1-201ENST00000384921 82 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 MIR29B2-201ENST00000385055 81 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 SNORA48.2-201ENST00000390926 124 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 U6atac.2-201ENST00000408644 118 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 HMGN2P35-201ENST00000412164 270 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 CBX3P6-201ENST00000430257 527 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AC005002.2-201ENST00000438228 269 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 SNORD127-201ENST00000458892 86 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AC091179.3-201ENST00000474761 144 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 DEFB131C-201ENST00000528817 165 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AC233702.2-202ENST00000562547 291 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 AC093732.2-201ENST00000607950 274 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms