Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-541P-201ENST00000384709 110 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 MIR487A-201ENST00000385009 80 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 MTCYBP4-201ENST00000401524 249 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 Y_RNA.604-201ENST00000410574 102 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 CBX3P6-201ENST00000430257 527 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 OR2AQ1P-201ENST00000451972 200 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 snoU13.30-201ENST00000458951 104 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 TOMM22P6-201ENST00000465035 409 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.52□□□□□ -2.01
USP38Q8NB14 RNU7-175P-201ENST00000515915 61 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.52□□□□□ -2.01
USP38Q8NB14 AL590705.4-201ENST00000532209 134 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 AC022616.8-201ENST00000533569 253 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.52□□□□□ -2.01
USP38Q8NB14 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 AC010928.2-201ENST00000588017 287 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.52□□□□□ -2.01
USP38Q8NB14 AC137590.2-201ENST00000619709 240 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USP38Q8NB14 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USP38Q8NB14 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP38Q8NB14 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USP38Q8NB14 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP38Q8NB14 RNU4-73P-201ENST00000363164 141 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 RNU6-1188P-201ENST00000363795 107 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.51□□□□□ -2.01
USP38Q8NB14 RNU6-26P-201ENST00000383985 107 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 Y_RNA.646-201ENST00000410980 101 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 AC243428.1-201ENST00000421099 264 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 AC027124.2-201ENST00000428249 105 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 MTCO3P29-201ENST00000432119 779 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 Y_RNA.653-201ENST00000459091 95 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 MTND3P22-201ENST00000510932 243 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 RNU6-307P-201ENST00000516743 106 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.51□□□□□ -2.01
USP38Q8NB14 GNAI2P1-201ENST00000541815 315 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 NDUFA5P6-201ENST00000542110 379 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 MIR4795-201ENST00000584182 89 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 MIR6845-201ENST00000613182 61 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 AC084781.2-201ENST00000615568 161 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
USP38Q8NB14 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP38Q8NB14 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USP38Q8NB14 MIR337-201ENST00000362281 93 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 RNU6-595P-201ENST00000363944 107 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 SNORD32B-201ENST00000364460 84 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 SNORA25.9-201ENST00000365087 128 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 RNU6-310P-201ENST00000384655 107 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 MT-TD-201ENST00000387419 68 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 RNU2-41P-201ENST00000410991 178 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 AL445305.1-201ENST00000432577 575 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 IPO7P1-201ENST00000442031 636 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 Y_RNA.632-201ENST00000459189 102 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 snoU13.18-201ENST00000459483 104 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 RPL30P10-201ENST00000488148 337 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 AC018868.1-201ENST00000491307 315 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.5□□□□□ -2.01
USP38Q8NB14 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.5□□□□□ -2.01
USP38Q8NB14 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 RNU5F-4P-201ENST00000516581 114 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 PRELID2P1-201ENST00000552837 301 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 AC005899.2-201ENST00000584353 90 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 AC016727.2-201ENST00000603988 621 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 AC005520.5-201ENST00000613926 164 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 MIR1248-201ENST00000629190 106 ntBASIC2.5□□□□□ -2.01
USP38Q8NB14 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.5□□□□□ -2.01
USP38Q8NB14 ZNF720P1-201ENST00000562403 1939 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 RNY1P16-201ENST00000363063 111 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 SNORA18.2-201ENST00000383865 132 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 Y_RNA.405-201ENST00000383979 100 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 Y_RNA.451-201ENST00000384200 100 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 Y_RNA.524-201ENST00000384564 100 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 Y_RNA.561-201ENST00000384694 100 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 RNU6-700P-201ENST00000391043 107 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.49□□□□□ -2.01
USP38Q8NB14 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.49□□□□□ -2.01
USP38Q8NB14 FGF7P4-201ENST00000509595 295 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 CYCSP26-201ENST00000534107 320 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.49□□□□□ -2.01
USP38Q8NB14 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.49□□□□□ -2.01
USP38Q8NB14 AC005014.2-201ENST00000607795 599 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.49□□□□□ -2.01
USP38Q8NB14 MIR6840-201ENST00000611937 71 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 AC022202.1-201ENST00000613515 211 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP38Q8NB14 ZNF204P-201ENST00000416749 2397 ntBASIC2.49□□□□□ -2.01
USP38Q8NB14 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.49□□□□□ -2.01
USP38Q8NB14 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USP38Q8NB14 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.48□□□□□ -2.01
USP38Q8NB14 SNORD115-3-201ENST00000363100 82 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 RNU1-148P-201ENST00000384472 162 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 MIR153-2-201ENST00000385225 87 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 MTCO2P27-201ENST00000420740 428 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 RPS15AP28-201ENST00000435088 386 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 AC018634.1-201ENST00000437554 401 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms