Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC103851.1-201ENST00000506833 274 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 MIR3945-201ENST00000581853 98 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC016727.2-201ENST00000603988 621 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 RBM11P1-201ENST00000604951 799 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AL590808.1-201ENST00000618696 141 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC099654.14-201ENST00000638599 341 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 ZNF355P-201ENST00000427301 3216 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-438P-201ENST00000365561 103 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 SNORA18.2-201ENST00000383865 132 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-842P-201ENST00000384269 107 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.533-201ENST00000384596 114 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 MIR32-201ENST00000384965 70 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 RNA5SP465-201ENST00000391195 109 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AC138393.2-201ENST00000414742 246 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 PDCL2P1-201ENST00000419302 352 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AL358453.1-201ENST00000422522 250 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AL445646.1-201ENST00000431784 216 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 HMGB1P18-201ENST00000438801 619 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 OR2AQ1P-201ENST00000451972 200 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 RPS23P5-201ENST00000495419 428 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AC107393.1-201ENST00000512403 346 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 RNVU1-2-201ENST00000516326 135 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 MIR1273D-201ENST00000577266 86 ntBASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC71LQ8N9Z2 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.2-201ENST00000362330 96 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-1026P-201ENST00000384465 108 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-601P-201ENST00000384540 107 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-160P-201ENST00000384591 107 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC019129.1-201ENST00000403786 261 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AL023284.1-201ENST00000403956 276 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AL033519.2-201ENST00000403958 392 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 RPL37P10-201ENST00000412884 288 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC139712.2-201ENST00000424302 339 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC098614.3-201ENST00000438957 440 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AL035666.1-201ENST00000446195 348 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 SNORD5.1-201ENST00000458800 75 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 TOMM22P6-201ENST00000465035 409 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC116353.2-201ENST00000505332 712 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-1016P-201ENST00000516689 94 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC010928.2-201ENST00000588017 287 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 SNRPGP19-201ENST00000603826 189 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 CYP2C61P-201ENST00000604072 290 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC018462.2-201ENST00000605375 395 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 SCARNA4-201ENST00000629045 128 ntBASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC71LQ8N9Z2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 RNU4-9P-201ENST00000364951 139 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 SNORD81.2-201ENST00000365153 76 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.339-201ENST00000365325 102 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 XGY1-201ENST00000381172 446 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 SNORA70B-201ENST00000384210 135 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 SNORA64-201ENST00000384674 134 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-1050P-201ENST00000410388 107 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 MTND4P17-201ENST00000470444 350 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 HMGN1P12-201ENST00000499125 195 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.670-201ENST00000516255 105 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 SNORA20.3-201ENST00000516880 132 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 MIR3169-201ENST00000578032 83 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 MIR4713-201ENST00000582691 75 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 MIR5006-201ENST00000583027 110 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AC005730.3-201ENST00000583067 366 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AL158827.2-201ENST00000602494 330 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 7SK.7-201ENST00000603504 247 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 uc_338.5-201ENST00000611839 155 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms