Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL391516.1-201ENST00000554380 2449 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 RNA5SP323-201ENST00000391094 133 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 MIR1253-201ENST00000408273 105 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 CDK8P2-201ENST00000415020 547 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 PIGFP2-201ENST00000421400 651 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 MTCO2P34-201ENST00000421994 607 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 CYCSP46-201ENST00000423569 204 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 HMGN2P34-201ENST00000437647 269 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AC004386.2-201ENST00000441858 148 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 DYNLT3P2-201ENST00000442517 295 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 CYCSP23-201ENST00000519781 313 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AC136443.5-201ENST00000603741 370 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AP001596.2-201ENST00000608410 312 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AC027449.1-201ENST00000608890 407 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 AC068647.2-201ENST00000637380 353 ntBASIC0.77□□□□□ -2.29
ZIC4Q8N9L1 RNU6-227P-201ENST00000362865 103 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 RNU6-282P-201ENST00000365357 103 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 BX295541.1-201ENST00000417774 250 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 NFU1P2-201ENST00000448700 469 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 AC016717.1-201ENST00000448918 286 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 RNU7-138P-201ENST00000459479 64 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 RNU6-612P-201ENST00000516909 102 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 AL391840.1-201ENST00000571144 367 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 AC136932.1-201ENST00000574771 208 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 BNIP3P39-201ENST00000601077 554 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 Z99497.2-201ENST00000603634 310 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 MIR6504-201ENST00000613520 61 ntBASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
ZIC4Q8N9L1 RNU6-181P-201ENST00000363225 107 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 SNORA33-201ENST00000363664 130 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RNU6-417P-201ENST00000384712 107 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 MIR549A-201ENST00000385268 96 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RNU2-9P-201ENST00000410194 145 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RNA5SP494-201ENST00000410653 129 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RPS26P42-201ENST00000413485 326 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC009237.7-201ENST00000447357 229 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 SNRPGP9-201ENST00000456025 225 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RNU6-1037P-201ENST00000459571 107 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RPL39P38-201ENST00000467018 153 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 RNU6-445P-201ENST00000516949 107 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AP001372.4-201ENST00000524889 472 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC016727.2-201ENST00000603988 621 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC008536.2-201ENST00000607284 349 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC009509.4-201ENST00000619202 509 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 AC006001.4-201ENST00000622243 395 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 OR4G1P-203ENST00000641984 1631 ntBASIC0.75□□□□□ -2.29
ZIC4Q8N9L1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 FGF7P2-201ENST00000332473 296 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 RNU6-517P-201ENST00000384362 110 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 RNU6-297P-201ENST00000384636 107 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 RPL21P1-201ENST00000399532 476 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AL356776.1-201ENST00000406574 447 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 MTND4P32-201ENST00000437189 1237 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AL356010.1-201ENST00000456364 102 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AC010493.1-201ENST00000513479 292 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 RNU6-759P-201ENST00000516740 103 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 SNORA70.22-201ENST00000517160 124 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 SUMO2P16-201ENST00000519475 264 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 SUB1P2-201ENST00000556401 297 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 MIR4742-201ENST00000581069 85 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AC068790.2-201ENST00000602601 557 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AL929325.1-201ENST00000603096 117 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AP000907.4-201ENST00000604143 237 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AC087683.2-201ENST00000611384 326 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
ZIC4Q8N9L1 AL390237.1-201ENST00000404226 1415 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 MTND4P5-201ENST00000435821 1374 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNU6-1305P-201ENST00000364353 104 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 MIR499A-201ENST00000384903 122 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms