Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AC016925.1-201ENST00000458303 298 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 AC007547.1-201ENST00000462177 490 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 TRBVA-201ENST00000498804 316 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.1□□□□□ -2.07
NME8Q8N427 RNU2-34P-201ENST00000516534 121 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 RNU6-1098P-201ENST00000516772 96 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 MIR5094-201ENST00000578766 85 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.1□□□□□ -2.07
NME8Q8N427 AC009994.1-201ENST00000606889 253 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 AC122108.2-201ENST00000611946 526 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 AC002553.4-201ENST00000616896 331 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 DUXAP9-208ENST00000622815 614 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 AL133216.2-202ENST00000634512 349 ntBASIC2.1□□□□□ -2.07
NME8Q8N427 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NME8Q8N427 MIR126-201ENST00000362291 85 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 Y_RNA.100-201ENST00000363141 102 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 MIR520A-201ENST00000384862 85 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 RNU6-1093P-201ENST00000391194 107 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 MIR320B2-201ENST00000408479 138 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 MIR1267-201ENST00000408723 78 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 AL513185.2-201ENST00000425543 193 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 AL603825.1-201ENST00000438481 80 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 RN7SL274P-201ENST00000492268 272 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 AC091885.1-201ENST00000506658 268 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 RNU6-970P-201ENST00000516312 107 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 RNA5SP481-201ENST00000516814 122 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 RNU6-1088P-201ENST00000516850 104 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 RNU6-612P-201ENST00000516909 102 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 SNORA31.17-201ENST00000516953 127 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 SCOCP1-201ENST00000554676 349 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 MIR3672-201ENST00000584290 82 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 AC083806.3-201ENST00000614016 455 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.09□□□□□ -2.07
NME8Q8N427 AL159152.1-201ENST00000635019 2587 ntBASIC2.09□□□□□ -2.07
NME8Q8N427 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
NME8Q8N427 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
NME8Q8N427 MIR424-201ENST00000362227 98 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 RNU6-562P-201ENST00000362731 107 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 SNORA36A-201ENST00000384221 132 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 RNU6-831P-201ENST00000384548 107 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NME8Q8N427 AL357134.1-201ENST00000445848 426 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 TOMM22P6-201ENST00000465035 409 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 AC114982.1-201ENST00000469402 321 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 AC016925.2-201ENST00000605108 242 ntBASIC2.08□□□□□ -2.08
NME8Q8N427 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.08□□□□□ -2.08
NME8Q8N427 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NME8Q8N427 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.07□□□□□ -2.08
NME8Q8N427 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NME8Q8N427 RNU6-1317P-201ENST00000364582 104 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NME8Q8N427 Y_RNA.473-201ENST00000384333 102 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 MTND3P9-201ENST00000429526 346 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 MTND1P2-201ENST00000430604 821 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 MTCO3P18-201ENST00000440206 761 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.07□□□□□ -2.08
NME8Q8N427 RNU7-187P-201ENST00000458985 68 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 RPL9P9-202ENST00000466501 579 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 AC021146.2-201ENST00000504736 556 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.07□□□□□ -2.08
NME8Q8N427 ATP5EP1-201ENST00000510257 156 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 RNU6-1314P-201ENST00000517139 104 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.07□□□□□ -2.08
NME8Q8N427 MIR4753-201ENST00000585119 83 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 AP003465.2-201ENST00000602571 373 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 SNRPGP19-201ENST00000603826 189 ntBASIC2.07□□□□□ -2.08
NME8Q8N427 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
NME8Q8N427 SNORD33-201ENST00000362761 85 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 Y_RNA.151-201ENST00000363566 112 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 RNU6-306P-201ENST00000384617 107 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 RNU6-360P-201ENST00000390944 104 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 EIF4E2P1-201ENST00000393781 255 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.06□□□□□ -2.08
NME8Q8N427 AC018710.1-201ENST00000506509 158 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 RNU4-49P-201ENST00000516080 140 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.06□□□□□ -2.08
NME8Q8N427 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.06□□□□□ -2.08
NME8Q8N427 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.06□□□□□ -2.08
NME8Q8N427 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NME8Q8N427 U6atac.1-201ENST00000616025 117 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 AC137590.2-201ENST00000619709 240 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 CASC19-280ENST00000642102 1351 ntBASIC2.06□□□□□ -2.08
NME8Q8N427 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NME8Q8N427 RNU6-112P-201ENST00000363599 104 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 RNU6-1283P-201ENST00000365314 105 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 RNU6-1329P-201ENST00000365664 107 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.05□□□□□ -2.08
NME8Q8N427 Z82205.1-201ENST00000428456 297 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 USP9YP28-201ENST00000435142 589 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 MTATP6P13-201ENST00000438531 667 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.05□□□□□ -2.08
NME8Q8N427 MTND1P11-201ENST00000456661 876 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.05□□□□□ -2.08
NME8Q8N427 AC010409.1-201ENST00000487382 476 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 MTCO2P30-201ENST00000503662 364 ntBASIC2.05□□□□□ -2.08
NME8Q8N427 AC096745.1-201ENST00000509945 370 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms