Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 Y_RNA.796-201ENST00000364268 102 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 Y_RNA.799-201ENST00000364992 102 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 AL138878.1-201ENST00000405131 347 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP104-201ENST00000410989 118 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 AC002075.2-201ENST00000425207 252 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 AL157831.1-201ENST00000426134 473 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 AC016717.1-201ENST00000448918 286 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 RPL30P14-201ENST00000482744 348 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 MIR449C-201ENST00000516047 92 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 RNU1-61P-201ENST00000516107 151 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 RNU6-126P-201ENST00000516685 103 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 MIR4662B-201ENST00000579498 81 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 AC008745.1-201ENST00000604064 271 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 MIR6076-201ENST00000617521 113 ntBASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC116Q8IYX3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 Y_RNA.66-201ENST00000362862 102 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 RNU6-1209P-201ENST00000363655 107 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 RNU6-1138P-201ENST00000365359 106 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 RNU6-198P-201ENST00000384258 104 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 MIR562-201ENST00000384894 95 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP354-201ENST00000391247 136 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP136-201ENST00000410906 107 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 HLA-N-201ENST00000437516 135 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 OR9P1P-201ENST00000496431 281 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP236-201ENST00000516169 116 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 SNORA40.13-201ENST00000516379 120 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 AP000867.2-201ENST00000532468 320 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 AC096577.2-201ENST00000611455 153 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 AC006435.5-201ENST00000624486 112 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 LINC02471-203ENST00000641941 4752 ntBASIC4.01□□□□□ -1.77
CCDC116Q8IYX3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC116Q8IYX3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC116Q8IYX3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4□□□□□ -1.77
CCDC116Q8IYX3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC116Q8IYX3 Y_RNA.486-201ENST00000384398 107 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 MIR29B2-201ENST00000385055 81 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 EDDM3CP-201ENST00000415977 425 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 AC010099.1-201ENST00000455434 375 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 RNU7-170P-201ENST00000459303 61 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 RPL32P34-201ENST00000486380 400 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4□□□□□ -1.77
CCDC116Q8IYX3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4□□□□□ -1.77
CCDC116Q8IYX3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
CCDC116Q8IYX3 CYP4A43P-201ENST00000568156 121 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 AL356218.2-201ENST00000605264 187 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4□□□□□ -1.77
CCDC116Q8IYX3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4□□□□□ -1.77
CCDC116Q8IYX3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC116Q8IYX3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4□□□□□ -1.77
CCDC116Q8IYX3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4□□□□□ -1.77
CCDC116Q8IYX3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC116Q8IYX3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 RNU1-14P-201ENST00000362759 152 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 RPS4XP11-201ENST00000446897 772 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 RPS29P19-201ENST00000479709 171 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 AC025445.1-201ENST00000502728 300 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 ATP5EP1-201ENST00000510257 156 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP49-201ENST00000516450 115 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP519-201ENST00000516480 119 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 RNU6-365P-201ENST00000517113 106 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 AP003327.1-201ENST00000529684 127 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 MIR4277-201ENST00000578298 84 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 MIR3129-201ENST00000581095 76 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 AC008739.2-201ENST00000597006 317 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 AC002064.3-201ENST00000623448 346 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 AC006504.1-201ENST00000562493 3666 ntBASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
CCDC116Q8IYX3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 AC058791.1-201ENST00000608412 3198 ntBASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 RNU1-132P-201ENST00000364300 164 ntBASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms