Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC138393.2-201ENST00000414742 246 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 PDCL2P1-201ENST00000419302 352 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 HMGB1P18-201ENST00000438801 619 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 RPL23AP75-201ENST00000491601 451 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 RNA5SP490-201ENST00000517141 136 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 ANP32BP3-201ENST00000559213 706 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 MIR3683-201ENST00000580847 82 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 MIR4801-201ENST00000582704 82 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 AC009994.1-201ENST00000606889 253 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 AC005520.5-201ENST00000613926 164 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 ZNF702P-202ENST00000434269 1966 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 ZNF72P-201ENST00000425869 1908 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 RNA5SP190-201ENST00000365222 118 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 RNU6-234P-201ENST00000365229 104 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 SNORA18.2-201ENST00000383865 132 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 MIR1262-201ENST00000408276 93 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 RPL37P10-201ENST00000412884 288 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 Z82188.1-201ENST00000436709 154 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 AC098614.3-201ENST00000438957 440 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 SNORD13-201ENST00000459299 104 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 MTND4P17-201ENST00000470444 350 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 AC132942.1-201ENST00000486753 483 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 AC093259.1-201ENST00000509755 300 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 RNU5F-4P-201ENST00000516581 114 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 RNU6-1016P-201ENST00000516689 94 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 MIR514B-201ENST00000516774 80 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 RNA5SP137-201ENST00000516833 135 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 SNORA20.3-201ENST00000516880 132 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC60Q8IWA6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.48-201ENST00000362710 103 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 SNORD81.2-201ENST00000365153 76 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 RNU6-601P-201ENST00000384540 107 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.533-201ENST00000384596 114 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 MIR487A-201ENST00000385009 80 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 SNORA17.3-201ENST00000391159 129 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 HMGN2P39-201ENST00000398005 273 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AL357139.1-201ENST00000407792 426 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 EIF4EP2-201ENST00000422816 654 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.638-201ENST00000459374 113 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 SNORA25.15-201ENST00000516487 89 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AC005730.3-201ENST00000583067 366 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AC008749.1-201ENST00000597650 306 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AC016727.2-201ENST00000603988 621 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AC022306.2-201ENST00000617563 647 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 SCARNA4-201ENST00000629045 128 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 TPTEP1-208ENST00000636884 213 ntBASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC60Q8IWA6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.88-201ENST00000363029 99 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 RNU6-842P-201ENST00000384269 107 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 MIR32-201ENST00000384965 70 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 AL512604.1-201ENST00000404812 257 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 HMGN2P18-201ENST00000450680 270 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 OR2AQ1P-201ENST00000451972 200 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 RNU7-14P-201ENST00000459331 62 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 HMGN1P12-201ENST00000499125 195 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 AC026782.1-201ENST00000512952 449 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 RNU6-1098P-201ENST00000516772 96 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 AC243960.4-201ENST00000600532 288 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 AC018462.2-201ENST00000605375 395 ntBASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC60Q8IWA6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.2-201ENST00000362330 96 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.166-201ENST00000363730 102 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 RNU4-9P-201ENST00000364951 139 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.339-201ENST00000365325 102 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 SNORD14D-201ENST00000384390 87 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.594-201ENST00000410373 140 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms